Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YEL077CYEL077C 3834 nt6.18□□□□□ -1.42
SSL2Q00578 PRS2YER099C 957 nt6.18□□□□□ -1.42
SSL2Q00578 PRE3YJL001W 648 nt6.18□□□□□ -1.42
SSL2Q00578 YLR157W-EYLR157W-E 165 nt6.18□□□□□ -1.42
SSL2Q00578 CNM67YNL225C 1746 nt6.18□□□□□ -1.42
SSL2Q00578 GPI18YBR004C 1302 nt6.18□□□□□ -1.42
SSL2Q00578 STD1YOR047C 1335 nt6.18□□□□□ -1.42
SSL2Q00578 SSY5YJL156C 2100 nt6.17□□□□□ -1.42
SSL2Q00578 SHE10YGL228W 1734 nt6.17□□□□□ -1.42
SSL2Q00578 SPO7YAL009W 780 nt6.17□□□□□ -1.42
SSL2Q00578 HOR7YMR251W-A 180 nt6.17□□□□□ -1.42
SSL2Q00578 PEX34YCL056C 435 nt6.17□□□□□ -1.42
SSL2Q00578 UBA1YKL210W 3075 nt6.17□□□□□ -1.42
SSL2Q00578 UTP7YER082C 1665 nt6.17□□□□□ -1.42
SSL2Q00578 SHM1YBR263W 1473 nt6.16□□□□□ -1.42
SSL2Q00578 NOP7YGR103W 1818 nt6.16□□□□□ -1.42
SSL2Q00578 ATG18YFR021W 1503 nt6.16□□□□□ -1.42
SSL2Q00578 YDL157CYDL157C 357 nt6.16□□□□□ -1.42
SSL2Q00578 COX3Q0275 810 nt6.16□□□□□ -1.42
SSL2Q00578 YLR184WYLR184W 348 nt6.16□□□□□ -1.42
SSL2Q00578 DIA1YMR316W 1011 nt6.16□□□□□ -1.42
SSL2Q00578 WHI4YDL224C 1950 nt6.16□□□□□ -1.42
SSL2Q00578 NEM1YHR004C 1341 nt6.16□□□□□ -1.42
SSL2Q00578 ISN1YOR155C 1353 nt6.16□□□□□ -1.42
SSL2Q00578 UGO1YDR470C 1509 nt6.15□□□□□ -1.42
SSL2Q00578 YCR006CYCR006C 474 nt6.15□□□□□ -1.42
SSL2Q00578 FYV1YDR024W 486 nt6.15□□□□□ -1.42
SSL2Q00578 NQM1YGR043C 1002 nt6.15□□□□□ -1.42
SSL2Q00578 PHA2YNL316C 1005 nt6.15□□□□□ -1.42
SSL2Q00578 RDL1YOR285W 420 nt6.15□□□□□ -1.42
SSL2Q00578 VPS28YPL065W 729 nt6.15□□□□□ -1.42
SSL2Q00578 YPL102CYPL102C 303 nt6.15□□□□□ -1.42
SSL2Q00578 MKC7YDR144C 1791 nt6.15□□□□□ -1.43
SSL2Q00578 YIR007WYIR007W 2295 nt6.15□□□□□ -1.43
SSL2Q00578 YFL034WYFL034W 3222 nt6.15□□□□□ -1.43
SSL2Q00578 SAS4YDR181C 1446 nt6.15□□□□□ -1.43
SSL2Q00578 SIA1YOR137C 1869 nt6.14□□□□□ -1.43
SSL2Q00578 YCR047W-AYCR047W-A 207 nt6.14□□□□□ -1.43
SSL2Q00578 tN(GUU)CtN(GUU)C 74 nt6.14□□□□□ -1.43
SSL2Q00578 tN(GUU)FtN(GUU)F 74 nt6.14□□□□□ -1.43
SSL2Q00578 tN(GUU)GtN(GUU)G 74 nt6.14□□□□□ -1.43
SSL2Q00578 tN(GUU)KtN(GUU)K 74 nt6.14□□□□□ -1.43
SSL2Q00578 tN(GUU)LtN(GUU)L 74 nt6.14□□□□□ -1.43
SSL2Q00578 tN(GUU)N1tN(GUU)N1 74 nt6.14□□□□□ -1.43
SSL2Q00578 tN(GUU)N2tN(GUU)N2 74 nt6.14□□□□□ -1.43
SSL2Q00578 tN(GUU)O1tN(GUU)O1 74 nt6.14□□□□□ -1.43
SSL2Q00578 tN(GUU)O2tN(GUU)O2 74 nt6.14□□□□□ -1.43
SSL2Q00578 tN(GUU)PtN(GUU)P 74 nt6.14□□□□□ -1.43
SSL2Q00578 PEX22YAL055W 543 nt6.14□□□□□ -1.43
SSL2Q00578 TRK2YKR050W 2670 nt6.14□□□□□ -1.43
SSL2Q00578 IMA2YOL157C 1770 nt6.13□□□□□ -1.43
SSL2Q00578 MNN2YBR015C 1794 nt6.13□□□□□ -1.43
SSL2Q00578 MTQ2YDR140W 666 nt6.13□□□□□ -1.43
SSL2Q00578 GLO2YDR272W 825 nt6.13□□□□□ -1.43
SSL2Q00578 GAL83YER027C 1254 nt6.13□□□□□ -1.43
SSL2Q00578 YKL031WYKL031W 414 nt6.13□□□□□ -1.43
SSL2Q00578 MRPL15YLR312W-A 762 nt6.13□□□□□ -1.43
SSL2Q00578 YNL194CYNL194C 906 nt6.13□□□□□ -1.43
SSL2Q00578 MUM3YOR298W 1440 nt6.13□□□□□ -1.43
SSL2Q00578 UTP18YJL069C 1785 nt6.13□□□□□ -1.43
SSL2Q00578 ASF2YDL197C 1578 nt6.12□□□□□ -1.43
SSL2Q00578 GCS1YDL226C 1059 nt6.12□□□□□ -1.43
SSL2Q00578 YGR066CYGR066C 879 nt6.12□□□□□ -1.43
SSL2Q00578 PRP40YKL012W 1752 nt6.12□□□□□ -1.43
SSL2Q00578 CBT1YKL208W 816 nt6.12□□□□□ -1.43
SSL2Q00578 RHO4YKR055W 876 nt6.12□□□□□ -1.43
SSL2Q00578 OMA1YKR087C 1038 nt6.12□□□□□ -1.43
SSL2Q00578 YLR412C-AYLR412C-A 207 nt6.12□□□□□ -1.43
SSL2Q00578 DAK1YML070W 1755 nt6.12□□□□□ -1.43
SSL2Q00578 PGA3YML125C 939 nt6.12□□□□□ -1.43
SSL2Q00578 RGT1YKL038W 3513 nt6.12□□□□□ -1.43
SSL2Q00578 VHS1YDR247W 1386 nt6.11□□□□□ -1.43
SSL2Q00578 YLR126CYLR126C 756 nt6.11□□□□□ -1.43
SSL2Q00578 RUF21RUF21 707 nt6.11□□□□□ -1.43
SSL2Q00578 ENV7YPL236C 1095 nt6.11□□□□□ -1.43
SSL2Q00578 DED81YHR019C 1665 nt6.1□□□□□ -1.43
SSL2Q00578 DPH2YKL191W 1605 nt6.1□□□□□ -1.43
SSL2Q00578 snR57snR57 88 nt6.1□□□□□ -1.43
SSL2Q00578 EAF5YEL018W 840 nt6.1□□□□□ -1.43
SSL2Q00578 YGR291CYGR291C 222 nt6.1□□□□□ -1.43
SSL2Q00578 MRP51YPL118W 1035 nt6.1□□□□□ -1.43
SSL2Q00578 YBR298C-AYBR298C-A 222 nt6.1□□□□□ -1.43
SSL2Q00578 UTP9YHR196W 1728 nt6.1□□□□□ -1.43
SSL2Q00578 SSZ1YHR064C 1617 nt6.1□□□□□ -1.43
SSL2Q00578 RKM4YDR257C 1485 nt6.09□□□□□ -1.43
SSL2Q00578 TEF1YPR080W 1377 nt6.09□□□□□ -1.43
SSL2Q00578 TEF2YBR118W 1377 nt6.09□□□□□ -1.43
SSL2Q00578 RPN5YDL147W 1338 nt6.09□□□□□ -1.43
SSL2Q00578 MED2YDL005C 1296 nt6.09□□□□□ -1.43
SSL2Q00578 YDL144CYDL144C 1071 nt6.09□□□□□ -1.43
SSL2Q00578 YDR154CYDR154C 351 nt6.09□□□□□ -1.43
SSL2Q00578 CDC43YGL155W 1131 nt6.09□□□□□ -1.43
SSL2Q00578 YKR073CYKR073C 321 nt6.09□□□□□ -1.43
SSL2Q00578 LST8YNL006W 912 nt6.09□□□□□ -1.43
SSL2Q00578 HRP1YOL123W 1605 nt6.09□□□□□ -1.43
SSL2Q00578 SMF3YLR034C 1422 nt6.08□□□□□ -1.44
SSL2Q00578 SPG1YGR236C 288 nt6.08□□□□□ -1.44
SSL2Q00578 VAM3YOR106W 852 nt6.08□□□□□ -1.44
SSL2Q00578 NRD1YNL251C 1728 nt6.08□□□□□ -1.44
SSL2Q00578 FHL1YPR104C 2811 nt6.07□□□□□ -1.44
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms