Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRPXP78539 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.17■□□□□ 0.66
SRPXP78539 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SRPXP78539 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRPXP78539 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRPXP78539 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.17■□□□□ 0.66
SRPXP78539 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRPXP78539 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRPXP78539 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRPXP78539 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SRPXP78539 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRPXP78539 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPXP78539 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRPXP78539 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPXP78539 DUX4L11-201ENST00000611504 1267 ntBASIC19.16■□□□□ 0.66
SRPXP78539 DUX4L12-201ENST00000614593 1267 ntBASIC19.16■□□□□ 0.66
SRPXP78539 DUX4L14-201ENST00000621227 1267 ntBASIC19.16■□□□□ 0.66
SRPXP78539 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPXP78539 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.16■□□□□ 0.66
SRPXP78539 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPXP78539 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SRPXP78539 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPXP78539 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.16■□□□□ 0.66
SRPXP78539 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.15■□□□□ 0.66
SRPXP78539 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRPXP78539 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRPXP78539 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRPXP78539 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRPXP78539 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.15■□□□□ 0.66
SRPXP78539 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRPXP78539 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRPXP78539 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRPXP78539 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.15■□□□□ 0.66
SRPXP78539 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRPXP78539 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRPXP78539 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SRPXP78539 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SRPXP78539 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SRPXP78539 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRPXP78539 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SRPXP78539 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SRPXP78539 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SRPXP78539 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.14■□□□□ 0.65
SRPXP78539 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.14■□□□□ 0.65
SRPXP78539 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.14■□□□□ 0.65
SRPXP78539 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRPXP78539 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPXP78539 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRPXP78539 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.13■□□□□ 0.65
SRPXP78539 PKD1P6-201ENST00000343738 4769 ntBASIC19.13■□□□□ 0.65
SRPXP78539 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRPXP78539 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRPXP78539 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
SRPXP78539 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRPXP78539 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRPXP78539 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.12■□□□□ 0.65
SRPXP78539 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.12■□□□□ 0.65
SRPXP78539 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRPXP78539 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.12■□□□□ 0.65
SRPXP78539 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRPXP78539 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRPXP78539 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRPXP78539 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRPXP78539 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRPXP78539 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.11■□□□□ 0.65
SRPXP78539 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRPXP78539 HLA-L-211ENST00000482052 1765 ntBASIC19.11■□□□□ 0.65
SRPXP78539 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRPXP78539 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SRPXP78539 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRPXP78539 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SRPXP78539 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPXP78539 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SRPXP78539 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SRPXP78539 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPXP78539 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SRPXP78539 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SRPXP78539 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRPXP78539 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SRPXP78539 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SRPXP78539 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRPXP78539 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRPXP78539 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRPXP78539 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRPXP78539 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRPXP78539 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRPXP78539 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRPXP78539 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SRPXP78539 MIR3960-201ENST00000583311 91 ntBASIC19.08■□□□□ 0.64
SRPXP78539 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.08■□□□□ 0.64
SRPXP78539 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SRPXP78539 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.08■□□□□ 0.64
SRPXP78539 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SRPXP78539 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.08■□□□□ 0.64
SRPXP78539 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRPXP78539 AL117328.2-201ENST00000624617 1940 ntBASIC19.08■□□□□ 0.64
SRPXP78539 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRPXP78539 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRPXP78539 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SRPXP78539 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms