Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RIPK4P57078 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.74■■■□□ 2.51
RIPK4P57078 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
RIPK4P57078 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
RIPK4P57078 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
RIPK4P57078 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RIPK4P57078 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RIPK4P57078 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
RIPK4P57078 Z92544.1-202ENST00000571933 1220 ntBASIC30.73■■■□□ 2.51
RIPK4P57078 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RIPK4P57078 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RIPK4P57078 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RIPK4P57078 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.73■■■□□ 2.51
RIPK4P57078 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RIPK4P57078 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RIPK4P57078 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
RIPK4P57078 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.72■■■□□ 2.51
RIPK4P57078 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.72■■■□□ 2.51
RIPK4P57078 MIR6089-201ENST00000616698 64 ntBASIC30.72■■■□□ 2.51
RIPK4P57078 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
RIPK4P57078 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
RIPK4P57078 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
RIPK4P57078 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
RIPK4P57078 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.71■■■□□ 2.51
RIPK4P57078 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
RIPK4P57078 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.71■■■□□ 2.51
RIPK4P57078 AF131216.4-201ENST00000638924 1588 ntBASIC30.71■■■□□ 2.51
RIPK4P57078 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.7■■■□□ 2.51
RIPK4P57078 BX664725.1-201ENST00000438252 379 ntBASIC30.7■■■□□ 2.51
RIPK4P57078 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RIPK4P57078 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RIPK4P57078 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RIPK4P57078 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.69■■■□□ 2.5
RIPK4P57078 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RIPK4P57078 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.69■■■□□ 2.5
RIPK4P57078 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
RIPK4P57078 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RIPK4P57078 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RIPK4P57078 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.68■■■□□ 2.5
RIPK4P57078 AC021242.3-201ENST00000607598 1377 ntBASIC30.67■■■□□ 2.5
RIPK4P57078 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RIPK4P57078 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RIPK4P57078 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
RIPK4P57078 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
RIPK4P57078 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RIPK4P57078 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RIPK4P57078 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RIPK4P57078 GUSBP5-201ENST00000418136 578 ntBASIC30.65■■■□□ 2.5
RIPK4P57078 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
RIPK4P57078 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.65■■■□□ 2.5
RIPK4P57078 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RIPK4P57078 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RIPK4P57078 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RIPK4P57078 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.64■■■□□ 2.5
RIPK4P57078 KRT125P-201ENST00000546827 989 ntBASIC30.64■■■□□ 2.5
RIPK4P57078 MIR4787-201ENST00000607364 84 ntBASIC30.64■■■□□ 2.5
RIPK4P57078 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RIPK4P57078 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
RIPK4P57078 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RIPK4P57078 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC30.63■■■□□ 2.49
RIPK4P57078 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RIPK4P57078 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RIPK4P57078 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RIPK4P57078 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.63■■■□□ 2.49
RIPK4P57078 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.63■■■□□ 2.49
RIPK4P57078 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
RIPK4P57078 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RIPK4P57078 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RIPK4P57078 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RIPK4P57078 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.62■■■□□ 2.49
RIPK4P57078 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RIPK4P57078 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.62■■■□□ 2.49
RIPK4P57078 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.62■■■□□ 2.49
RIPK4P57078 MED17-227ENST00000640521 2047 ntTSL 5 BASIC30.61■■■□□ 2.49
RIPK4P57078 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RIPK4P57078 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.61■■■□□ 2.49
RIPK4P57078 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.61■■■□□ 2.49
RIPK4P57078 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RIPK4P57078 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.6■■■□□ 2.49
RIPK4P57078 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
RIPK4P57078 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RIPK4P57078 AC138932.3-201ENST00000567634 1902 ntBASIC30.6■■■□□ 2.49
RIPK4P57078 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.6■■■□□ 2.49
RIPK4P57078 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.6■■■□□ 2.49
RIPK4P57078 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RIPK4P57078 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
RIPK4P57078 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.59■■■□□ 2.49
RIPK4P57078 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.59■■■□□ 2.49
RIPK4P57078 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.59■■■□□ 2.49
RIPK4P57078 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RIPK4P57078 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RIPK4P57078 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RIPK4P57078 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RIPK4P57078 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RIPK4P57078 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC30.58■■■□□ 2.49
RIPK4P57078 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.58■■■□□ 2.49
RIPK4P57078 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.58■■■□□ 2.49
RIPK4P57078 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RIPK4P57078 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.58■■■□□ 2.49
RIPK4P57078 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms