Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLDN12P56749 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN12P56749 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN12P56749 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CLDN12P56749 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN12P56749 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN12P56749 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN12P56749 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN12P56749 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN12P56749 HLA-L-211ENST00000482052 1765 ntBASIC20.21■□□□□ 0.83
CLDN12P56749 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN12P56749 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN12P56749 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.2■□□□□ 0.82
CLDN12P56749 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN12P56749 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN12P56749 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN12P56749 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.2■□□□□ 0.82
CLDN12P56749 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CLDN12P56749 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN12P56749 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.2■□□□□ 0.82
CLDN12P56749 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLDN12P56749 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.2■□□□□ 0.82
CLDN12P56749 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDN12P56749 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN12P56749 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CLDN12P56749 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN12P56749 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN12P56749 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN12P56749 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN12P56749 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN12P56749 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLDN12P56749 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.19■□□□□ 0.82
CLDN12P56749 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN12P56749 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLDN12P56749 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN12P56749 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN12P56749 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLDN12P56749 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLDN12P56749 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN12P56749 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN12P56749 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN12P56749 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN12P56749 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.18■□□□□ 0.82
CLDN12P56749 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN12P56749 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN12P56749 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN12P56749 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN12P56749 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLDN12P56749 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN12P56749 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN12P56749 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN12P56749 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN12P56749 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN12P56749 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.17■□□□□ 0.82
CLDN12P56749 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN12P56749 CR559946.2-201ENST00000623684 991 ntBASIC20.17■□□□□ 0.82
CLDN12P56749 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.17■□□□□ 0.82
CLDN12P56749 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CLDN12P56749 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN12P56749 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN12P56749 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CLDN12P56749 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN12P56749 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN12P56749 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.16■□□□□ 0.82
CLDN12P56749 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN12P56749 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CLDN12P56749 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN12P56749 ZNRF2P2-203ENST00000454624 420 ntBASIC20.16■□□□□ 0.82
CLDN12P56749 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.16■□□□□ 0.82
CLDN12P56749 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN12P56749 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN12P56749 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CLDN12P56749 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN12P56749 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.16■□□□□ 0.82
CLDN12P56749 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN12P56749 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN12P56749 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN12P56749 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN12P56749 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN12P56749 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN12P56749 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN12P56749 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN12P56749 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN12P56749 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN12P56749 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN12P56749 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CLDN12P56749 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
CLDN12P56749 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLDN12P56749 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN12P56749 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.14■□□□□ 0.81
CLDN12P56749 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN12P56749 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN12P56749 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.14■□□□□ 0.81
CLDN12P56749 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN12P56749 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLDN12P56749 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN12P56749 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN12P56749 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN12P56749 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN12P56749 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms