Protein–RNA interactions for Protein: P32842

VMA11, V-type proton ATPase subunit c', yeast

Predictions only

Length 164 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	P32842	ECM33	YBR078W	1290 nt		4.47	□□□□□ -1.69
VMA11	P32842	KTR3	YBR205W	1215 nt		4.47	□□□□□ -1.69
VMA11	P32842	UBX2	YML013W	1755 nt		4.47	□□□□□ -1.69
VMA11	P32842	SOG2	YOR353C	2376 nt		4.47	□□□□□ -1.69
VMA11	P32842	GFD1	YMR255W	567 nt		4.46	□□□□□ -1.7
VMA11	P32842	YNL019C	YNL019C	855 nt		4.46	□□□□□ -1.7
VMA11	P32842	YNL033W	YNL033W	855 nt		4.46	□□□□□ -1.7
VMA11	P32842	POR1	YNL055C	852 nt		4.46	□□□□□ -1.7
VMA11	P32842	YEH1	YLL012W	1722 nt		4.46	□□□□□ -1.7
VMA11	P32842	YJR015W	YJR015W	1533 nt		4.46	□□□□□ -1.7
VMA11	P32842	MMP1	YLL061W	1752 nt		4.45	□□□□□ -1.7
VMA11	P32842	NTH2	YBR001C	2343 nt		4.45	□□□□□ -1.7
VMA11	P32842	MHR1	YDR296W	681 nt		4.45	□□□□□ -1.7
VMA11	P32842	PRO3	YER023W	861 nt		4.45	□□□□□ -1.7
VMA11	P32842	FHN1	YGR131W	525 nt		4.45	□□□□□ -1.7
VMA11	P32842	PDR16	YNL231C	1056 nt		4.45	□□□□□ -1.7
VMA11	P32842	YOR318C	YOR318C	306 nt		4.45	□□□□□ -1.7
VMA11	P32842	SAM4	YPL273W	978 nt		4.45	□□□□□ -1.7
VMA11	P32842	VAN1	YML115C	1608 nt		4.44	□□□□□ -1.7
VMA11	P32842	YNR048W	YNR048W	1182 nt		4.44	□□□□□ -1.7
VMA11	P32842	RPS15	YOL040C	429 nt		4.44	□□□□□ -1.7
VMA11	P32842	RPT1	YKL145W	1404 nt		4.44	□□□□□ -1.7
VMA11	P32842	QDR3	YBR043C	2070 nt		4.44	□□□□□ -1.7
VMA11	P32842	DUR1,2	YBR208C	5508 nt		4.44	□□□□□ -1.7
VMA11	P32842	ATP1	YBL099W	1638 nt		4.43	□□□□□ -1.7
VMA11	P32842	ATE1	YGL017W	1512 nt		4.43	□□□□□ -1.7
VMA11	P32842	GET3	YDL100C	1065 nt		4.43	□□□□□ -1.7
VMA11	P32842	ORM1	YGR038W	669 nt		4.43	□□□□□ -1.7
VMA11	P32842	MDY2	YOL111C	639 nt		4.43	□□□□□ -1.7
VMA11	P32842	CKA2	YOR061W	1020 nt		4.43	□□□□□ -1.7
VMA11	P32842	OST3	YOR085W	1053 nt		4.43	□□□□□ -1.7
VMA11	P32842	CLB1	YGR108W	1416 nt		4.43	□□□□□ -1.7
VMA11	P32842	RBA50	YDR527W	1320 nt		4.43	□□□□□ -1.7
VMA11	P32842	HIR1	YBL008W	2523 nt		4.42	□□□□□ -1.7
VMA11	P32842	GRX4	YER174C	735 nt		4.42	□□□□□ -1.7
VMA11	P32842	YHR127W	YHR127W	732 nt		4.42	□□□□□ -1.7
VMA11	P32842	YLR283W	YLR283W	945 nt		4.42	□□□□□ -1.7
VMA11	P32842	DOM34	YNL001W	1161 nt		4.42	□□□□□ -1.7
VMA11	P32842	ARO10	YDR380W	1908 nt		4.42	□□□□□ -1.7
VMA11	P32842	TOS4	YLR183C	1470 nt		4.42	□□□□□ -1.7
VMA11	P32842	ENP1	YBR247C	1452 nt		4.42	□□□□□ -1.7
VMA11	P32842	TBF1	YPL128C	1689 nt		4.41	□□□□□ -1.7
VMA11	P32842	TEF1	YPR080W	1377 nt		4.41	□□□□□ -1.7
VMA11	P32842	TEF2	YBR118W	1377 nt		4.41	□□□□□ -1.7
VMA11	P32842	NOP2	YNL061W	1857 nt		4.41	□□□□□ -1.7
VMA11	P32842	PHO8	YDR481C	1701 nt		4.41	□□□□□ -1.7
VMA11	P32842	UBA2	YDR390C	1911 nt		4.41	□□□□□ -1.7
VMA11	P32842	PMT2	YAL023C	2280 nt		4.41	□□□□□ -1.7
VMA11	P32842	YGL185C	YGL185C	1140 nt		4.41	□□□□□ -1.7
VMA11	P32842	IPI1	YHR085W	1005 nt		4.41	□□□□□ -1.7
VMA11	P32842	ARP1	YHR129C	1155 nt		4.41	□□□□□ -1.7
VMA11	P32842	RBD2	YPL246C	789 nt		4.41	□□□□□ -1.7
VMA11	P32842	UBC4	YBR082C	447 nt		4.41	□□□□□ -1.7
VMA11	P32842	NDC1	YML031W	1968 nt		4.41	□□□□□ -1.7
VMA11	P32842	UTP7	YER082C	1665 nt		4.41	□□□□□ -1.7
VMA11	P32842	YHR045W	YHR045W	1683 nt		4.41	□□□□□ -1.7
VMA11	P32842	GEP3	YOR205C	1671 nt		4.41	□□□□□ -1.7
VMA11	P32842	IMA1	YGR287C	1770 nt		4.4	□□□□□ -1.7
VMA11	P32842	ELP2	YGR200C	2367 nt		4.4	□□□□□ -1.7
VMA11	P32842	YJR085C	YJR085C	318 nt		4.4	□□□□□ -1.71
VMA11	P32842	SFC1	YJR095W	969 nt		4.4	□□□□□ -1.71
VMA11	P32842	YKR073C	YKR073C	321 nt		4.4	□□□□□ -1.71
VMA11	P32842	YPR195C	YPR195C	330 nt		4.4	□□□□□ -1.71
VMA11	P32842	SEC18	YBR080C	2277 nt		4.4	□□□□□ -1.71
VMA11	P32842	IDP1	YDL066W	1287 nt		4.39	□□□□□ -1.71
VMA11	P32842	TDH3	YGR192C	999 nt		4.39	□□□□□ -1.71
VMA11	P32842	POM33	YLL023C	840 nt		4.39	□□□□□ -1.71
VMA11	P32842	BBP1	YPL255W	1158 nt		4.39	□□□□□ -1.71
VMA11	P32842	NGL2	YMR285C	1548 nt		4.39	□□□□□ -1.71
VMA11	P32842	GUA1	YMR217W	1578 nt		4.39	□□□□□ -1.71
VMA11	P32842	DPH2	YKL191W	1605 nt		4.39	□□□□□ -1.71
VMA11	P32842	NSI1	YDR026C	1713 nt		4.38	□□□□□ -1.71
VMA11	P32842	ACF2	YLR144C	2340 nt		4.38	□□□□□ -1.71
VMA11	P32842	ETR1	YBR026C	1143 nt		4.38	□□□□□ -1.71
VMA11	P32842	VCX1	YDL128W	1236 nt		4.37	□□□□□ -1.71
VMA11	P32842	SCW4	YGR279C	1161 nt		4.37	□□□□□ -1.71
VMA11	P32842	YJL068C	YJL068C	900 nt		4.37	□□□□□ -1.71
VMA11	P32842	YOL131W	YOL131W	327 nt		4.37	□□□□□ -1.71
VMA11	P32842	DFG5	YMR238W	1377 nt		4.37	□□□□□ -1.71
VMA11	P32842	ICE2	YIL090W	1476 nt		4.37	□□□□□ -1.71
VMA11	P32842	ACC1	YNR016C	6702 nt		4.36	□□□□□ -1.71
VMA11	P32842	DED81	YHR019C	1665 nt		4.36	□□□□□ -1.71
VMA11	P32842	DRS1	YLL008W	2259 nt		4.36	□□□□□ -1.71
VMA11	P32842	PRS1	YKL181W	1284 nt		4.36	□□□□□ -1.71
VMA11	P32842	ATP14	YLR295C	375 nt		4.36	□□□□□ -1.71
VMA11	P32842	BAP2	YBR068C	1830 nt		4.36	□□□□□ -1.71
VMA11	P32842	ABZ1	YNR033W	2364 nt		4.36	□□□□□ -1.71
VMA11	P32842	GYP1	YOR070C	1914 nt		4.36	□□□□□ -1.71
VMA11	P32842	FRE3	YOR381W	2136 nt		4.36	□□□□□ -1.71
VMA11	P32842	ASF2	YDL197C	1578 nt		4.36	□□□□□ -1.71
VMA11	P32842	YDR541C	YDR541C	1035 nt		4.35	□□□□□ -1.71
VMA11	P32842	tX(XXX)D	tX(XXX)D	100 nt		4.35	□□□□□ -1.71
VMA11	P32842	CBF1	YJR060W	1056 nt		4.35	□□□□□ -1.71
VMA11	P32842	YAL056C-A	YAL056C-A	351 nt		4.35	□□□□□ -1.71
VMA11	P32842	PPG1	YNR032W	1107 nt		4.35	□□□□□ -1.71
VMA11	P32842	COX11	YPL132W	903 nt		4.35	□□□□□ -1.71
VMA11	P32842	VPS72	YDR485C	2388 nt		4.34	□□□□□ -1.71
VMA11	P32842	RRP45	YDR280W	918 nt		4.34	□□□□□ -1.71
VMA11	P32842	YLR317W	YLR317W	435 nt		4.34	□□□□□ -1.71
VMA11	P32842	YML131W	YML131W	1098 nt		4.34	□□□□□ -1.71

Retrieved 100 of 7,029 protein–RNA pairs in 41.7 ms