Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 MOG1YJR074W 657 nt6.04□□□□□ -1.44
MSH1P25846 TAF4YMR005W 1167 nt6.04□□□□□ -1.44
MSH1P25846 PGA2YNL149C 390 nt6.04□□□□□ -1.44
MSH1P25846 PDB1YBR221C 1101 nt6.04□□□□□ -1.44
MSH1P25846 HXT3YDR345C 1704 nt6.04□□□□□ -1.44
MSH1P25846 RSM23YGL129C 1353 nt6.04□□□□□ -1.44
MSH1P25846 ALT1YLR089C 1779 nt6.03□□□□□ -1.44
MSH1P25846 YEL077CYEL077C 3834 nt6.03□□□□□ -1.44
MSH1P25846 VTH1YIL173W 4650 nt6.03□□□□□ -1.44
MSH1P25846 VTH2YJL222W 4650 nt6.03□□□□□ -1.44
MSH1P25846 SEC12YNR026C 1416 nt6.03□□□□□ -1.44
MSH1P25846 YET3YDL072C 612 nt6.03□□□□□ -1.44
MSH1P25846 ATO3YDR384C 828 nt6.03□□□□□ -1.44
MSH1P25846 NQM1YGR043C 1002 nt6.03□□□□□ -1.44
MSH1P25846 YHL018WYHL018W 363 nt6.03□□□□□ -1.44
MSH1P25846 SUP19tS(UGA)E 82 nt6.03□□□□□ -1.44
MSH1P25846 SUP17tS(UGA)I 82 nt6.03□□□□□ -1.44
MSH1P25846 SUP16tS(UGA)P 82 nt6.03□□□□□ -1.44
MSH1P25846 YIL060WYIL060W 435 nt6.03□□□□□ -1.44
MSH1P25846 SSY5YJL156C 2100 nt6.03□□□□□ -1.44
MSH1P25846 YKL031WYKL031W 414 nt6.03□□□□□ -1.44
MSH1P25846 CWC27YPL064C 906 nt6.03□□□□□ -1.44
MSH1P25846 SSZ1YHR064C 1617 nt6.03□□□□□ -1.44
MSH1P25846 UTP6YDR449C 1323 nt6.02□□□□□ -1.45
MSH1P25846 SPO77YLR341W 1434 nt6.02□□□□□ -1.45
MSH1P25846 NUP1YOR098C 3231 nt6.02□□□□□ -1.45
MSH1P25846 YEL028WYEL028W 462 nt6.02□□□□□ -1.45
MSH1P25846 COX17YLL009C 210 nt6.02□□□□□ -1.45
MSH1P25846 YET2YMR040W 483 nt6.02□□□□□ -1.45
MSH1P25846 CAF40YNL288W 1122 nt6.02□□□□□ -1.45
MSH1P25846 DBF4YDR052C 2115 nt6.02□□□□□ -1.45
MSH1P25846 ASK1YKL052C 879 nt6.01□□□□□ -1.45
MSH1P25846 YNL285WYNL285W 372 nt6.01□□□□□ -1.45
MSH1P25846 YPL014WYPL014W 1146 nt6.01□□□□□ -1.45
MSH1P25846 AMD1YML035C 2433 nt6.01□□□□□ -1.45
MSH1P25846 RNR3YIL066C 2610 nt6.01□□□□□ -1.45
MSH1P25846 RPT4YOR259C 1314 nt6□□□□□ -1.45
MSH1P25846 FRE7YOL152W 1863 nt6□□□□□ -1.45
MSH1P25846 VRP1YLR337C 2454 nt6□□□□□ -1.45
MSH1P25846 LAP2YNL045W 2016 nt6□□□□□ -1.45
MSH1P25846 YDR541CYDR541C 1035 nt6□□□□□ -1.45
MSH1P25846 RAI1YGL246C 1164 nt6□□□□□ -1.45
MSH1P25846 RPR2YIR015W 435 nt6□□□□□ -1.45
MSH1P25846 TEL2YGR099W 2067 nt6□□□□□ -1.45
MSH1P25846 GUP2YPL189W 1830 nt5.99□□□□□ -1.45
MSH1P25846 YRF1-4YLR466W 4149 nt5.99□□□□□ -1.45
MSH1P25846 IPK1YDR315C 846 nt5.99□□□□□ -1.45
MSH1P25846 BUR6YER159C 429 nt5.99□□□□□ -1.45
MSH1P25846 BUD32YGR262C 786 nt5.99□□□□□ -1.45
MSH1P25846 MAD2YJL030W 591 nt5.99□□□□□ -1.45
MSH1P25846 ADD37YMR184W 597 nt5.99□□□□□ -1.45
MSH1P25846 SEC17YBL050W 879 nt5.99□□□□□ -1.45
MSH1P25846 SKI8YGL213C 1194 nt5.98□□□□□ -1.45
MSH1P25846 MRPL4YLR439W 960 nt5.98□□□□□ -1.45
MSH1P25846 YBL044WYBL044W 369 nt5.98□□□□□ -1.45
MSH1P25846 YNL108CYNL108C 813 nt5.98□□□□□ -1.45
MSH1P25846 FAT3YKL187C 2253 nt5.97□□□□□ -1.45
MSH1P25846 HFI1YPL254W 1467 nt5.97□□□□□ -1.45
MSH1P25846 COX11YPL132W 903 nt5.97□□□□□ -1.45
MSH1P25846 YPR160C-AYPR160C-A 285 nt5.97□□□□□ -1.45
MSH1P25846 SKS1YPL026C 1509 nt5.97□□□□□ -1.45
MSH1P25846 ASP1YDR321W 1146 nt5.96□□□□□ -1.46
MSH1P25846 YER010CYER010C 705 nt5.96□□□□□ -1.46
MSH1P25846 ENV7YPL236C 1095 nt5.96□□□□□ -1.46
MSH1P25846 HOS1YPR068C 1413 nt5.96□□□□□ -1.46
MSH1P25846 EIS1YMR031C 2532 nt5.95□□□□□ -1.46
MSH1P25846 DHH1YDL160C 1521 nt5.95□□□□□ -1.46
MSH1P25846 FRE3YOR381W 2136 nt5.95□□□□□ -1.46
MSH1P25846 YDL129WYDL129W 876 nt5.95□□□□□ -1.46
MSH1P25846 ARP1YHR129C 1155 nt5.95□□□□□ -1.46
MSH1P25846 MRPL15YLR312W-A 762 nt5.95□□□□□ -1.46
MSH1P25846 MAC1YMR021C 1254 nt5.95□□□□□ -1.46
MSH1P25846 NCE103YNL036W 666 nt5.95□□□□□ -1.46
MSH1P25846 MLC2YPR188C 492 nt5.95□□□□□ -1.46
MSH1P25846 RBA50YDR527W 1320 nt5.95□□□□□ -1.46
MSH1P25846 LCB2YDR062W 1686 nt5.94□□□□□ -1.46
MSH1P25846 UTP4YDR324C 2331 nt5.94□□□□□ -1.46
MSH1P25846 ACC1YNR016C 6702 nt5.94□□□□□ -1.46
MSH1P25846 FOB1YDR110W 1701 nt5.94□□□□□ -1.46
MSH1P25846 SIT4YDL047W 936 nt5.94□□□□□ -1.46
MSH1P25846 GLO2YDR272W 825 nt5.94□□□□□ -1.46
MSH1P25846 YER187WYER187W 426 nt5.94□□□□□ -1.46
MSH1P25846 NOP13YNL175C 1212 nt5.94□□□□□ -1.46
MSH1P25846 GIP2YER054C 1647 nt5.94□□□□□ -1.46
MSH1P25846 LYS21YDL131W 1323 nt5.94□□□□□ -1.46
MSH1P25846 NOP2YNL061W 1857 nt5.94□□□□□ -1.46
MSH1P25846 VHS1YDR247W 1386 nt5.93□□□□□ -1.46
MSH1P25846 HER2YMR293C 1395 nt5.93□□□□□ -1.46
MSH1P25846 RAT1YOR048C 3021 nt5.93□□□□□ -1.46
MSH1P25846 ORC5YNL261W 1440 nt5.93□□□□□ -1.46
MSH1P25846 BIT2YBR270C 1638 nt5.93□□□□□ -1.46
MSH1P25846 YDL121CYDL121C 450 nt5.93□□□□□ -1.46
MSH1P25846 FMP48YGR052W 1110 nt5.93□□□□□ -1.46
MSH1P25846 DOT5YIL010W 648 nt5.93□□□□□ -1.46
MSH1P25846 RPS5YJR123W 678 nt5.93□□□□□ -1.46
MSH1P25846 YKR041WYKR041W 753 nt5.93□□□□□ -1.46
MSH1P25846 MRE11YMR224C 2079 nt5.93□□□□□ -1.46
MSH1P25846 ISR1YPR106W 1332 nt5.93□□□□□ -1.46
MSH1P25846 PRP46YPL151C 1356 nt5.93□□□□□ -1.46
MSH1P25846 BAP2YBR068C 1830 nt5.92□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms