Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC32.7■■■□□ 2.83
ATF3P18847 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC32.69■■■□□ 2.82
ATF3P18847 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
ATF3P18847 PTMA-205ENST00000410064 814 ntTSL 2 BASIC32.69■■■□□ 2.82
ATF3P18847 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC32.69■■■□□ 2.82
ATF3P18847 AP004609.3-201ENST00000610705 1884 ntBASIC32.69■■■□□ 2.82
ATF3P18847 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
ATF3P18847 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC32.68■■■□□ 2.82
ATF3P18847 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
ATF3P18847 IRS3P-201ENST00000223076 1006 ntBASIC32.67■■■□□ 2.82
ATF3P18847 LBH-205ENST00000407930 756 ntTSL 2 BASIC32.67■■■□□ 2.82
ATF3P18847 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC32.67■■■□□ 2.82
ATF3P18847 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC32.67■■■□□ 2.82
ATF3P18847 AC090877.2-201ENST00000558441 1738 ntBASIC32.66■■■□□ 2.82
ATF3P18847 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
ATF3P18847 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
ATF3P18847 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
ATF3P18847 AC027682.1-201ENST00000562846 899 ntBASIC32.66■■■□□ 2.82
ATF3P18847 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC32.66■■■□□ 2.82
ATF3P18847 AC092171.4-201ENST00000609130 632 ntBASIC32.66■■■□□ 2.82
ATF3P18847 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
ATF3P18847 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
ATF3P18847 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC32.65■■■□□ 2.82
ATF3P18847 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
ATF3P18847 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC32.65■■■□□ 2.82
ATF3P18847 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
ATF3P18847 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
ATF3P18847 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ATF3P18847 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
ATF3P18847 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC32.64■■■□□ 2.82
ATF3P18847 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
ATF3P18847 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC32.63■■■□□ 2.81
ATF3P18847 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC32.63■■■□□ 2.81
ATF3P18847 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
ATF3P18847 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
ATF3P18847 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC32.62■■■□□ 2.81
ATF3P18847 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC32.62■■■□□ 2.81
ATF3P18847 JTB-203ENST00000368589 1216 ntTSL 2 BASIC32.61■■■□□ 2.81
ATF3P18847 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC32.6■■■□□ 2.81
ATF3P18847 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
ATF3P18847 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
ATF3P18847 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC32.6■■■□□ 2.81
ATF3P18847 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ATF3P18847 SERBP1P1-201ENST00000396021 1160 ntBASIC32.59■■■□□ 2.81
ATF3P18847 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
ATF3P18847 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ATF3P18847 AC008764.7-201ENST00000593779 1081 ntBASIC32.58■■■□□ 2.81
ATF3P18847 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
ATF3P18847 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC32.57■■■□□ 2.8
ATF3P18847 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
ATF3P18847 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC32.57■■■□□ 2.8
ATF3P18847 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
ATF3P18847 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
ATF3P18847 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
ATF3P18847 RHOF-204ENST00000537265 699 ntTSL 2 BASIC32.56■■■□□ 2.8
ATF3P18847 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.56■■■□□ 2.8
ATF3P18847 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC32.55■■■□□ 2.8
ATF3P18847 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
ATF3P18847 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC32.55■■■□□ 2.8
ATF3P18847 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
ATF3P18847 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC32.55■■■□□ 2.8
ATF3P18847 IKBKGP1-201ENST00000612193 1073 ntBASIC32.55■■■□□ 2.8
ATF3P18847 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
ATF3P18847 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
ATF3P18847 AC005703.6-201ENST00000623265 1329 ntBASIC32.54■■■□□ 2.8
ATF3P18847 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
ATF3P18847 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC32.54■■■□□ 2.8
ATF3P18847 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC32.54■■■□□ 2.8
ATF3P18847 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC32.54■■■□□ 2.8
ATF3P18847 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ATF3P18847 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ATF3P18847 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
ATF3P18847 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
ATF3P18847 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
ATF3P18847 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC32.52■■■□□ 2.8
ATF3P18847 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC32.52■■■□□ 2.8
ATF3P18847 AC099791.1-201ENST00000416440 715 ntBASIC32.51■■■□□ 2.79
ATF3P18847 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC32.51■■■□□ 2.79
ATF3P18847 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC32.51■■■□□ 2.79
ATF3P18847 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC32.51■■■□□ 2.79
ATF3P18847 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
ATF3P18847 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
ATF3P18847 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC32.5■■■□□ 2.79
ATF3P18847 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
ATF3P18847 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC32.5■■■□□ 2.79
ATF3P18847 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC32.5■■■□□ 2.79
ATF3P18847 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC32.5■■■□□ 2.79
ATF3P18847 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
ATF3P18847 PTCHD3P2-201ENST00000424937 1205 ntBASIC32.5■■■□□ 2.79
ATF3P18847 AC022517.1-201ENST00000592429 346 ntBASIC32.5■■■□□ 2.79
ATF3P18847 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
ATF3P18847 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC32.49■■■□□ 2.79
ATF3P18847 ASB1-202ENST00000409297 878 ntTSL 5 BASIC32.49■■■□□ 2.79
ATF3P18847 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC32.49■■■□□ 2.79
ATF3P18847 SP2-202ENST00000613139 908 ntTSL 5 BASIC32.49■■■□□ 2.79
ATF3P18847 AC011298.3-201ENST00000615796 283 ntBASIC32.49■■■□□ 2.79
ATF3P18847 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
ATF3P18847 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
ATF3P18847 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC32.48■■■□□ 2.79
ATF3P18847 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC32.48■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms