Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 RAD51D-211ENST00000586210 1194 ntTSL 1 (best)20.7■□□□□ 0.91e-7■■■■□ 19.5
XRCC6P12956 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.55■□□□□ 0.881e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-215ENST00000599137 608 ntTSL 420.07■□□□□ 0.81e-7■■■■□ 19.5
XRCC6P12956 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.4■□□□□ 0.71e-7■■■■□ 19.5
XRCC6P12956 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.93■□□□□ 0.621e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-207ENST00000595136 531 ntTSL 418.82■□□□□ 0.61e-7■■■■□ 19.5
XRCC6P12956 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.61e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-204ENST00000594893 1453 ntTSL 218.76■□□□□ 0.591e-7■■■■□ 19.5
XRCC6P12956 PRKCB-210ENST00000498739 569 ntTSL 418.7■□□□□ 0.581e-7■■■■□ 19.5
XRCC6P12956 AC004223.3-202ENST00000591723 676 ntTSL 518.55■□□□□ 0.561e-7■■■■□ 19.5
XRCC6P12956 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.531e-7■■■■□ 19.5
XRCC6P12956 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.26■□□□□ 0.511e-7■■■■□ 19.5
XRCC6P12956 RAD51D-209ENST00000586044 1571 ntTSL 1 (best)18.11■□□□□ 0.491e-7■■■■□ 19.5
XRCC6P12956 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.72■□□□□ 0.431e-7■■■■□ 19.5
XRCC6P12956 PPIG-203ENST00000414307 1062 ntTSL 1 (best)17.57■□□□□ 0.41e-7■■■■□ 19.5
XRCC6P12956 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.42■□□□□ 0.381e-7■■■■□ 19.5
XRCC6P12956 AC004223.3-203ENST00000592181 787 ntAPPRIS ALT2 TSL 516.95■□□□□ 0.31e-7■■■■□ 19.5
XRCC6P12956 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.291e-7■■■■□ 19.5
XRCC6P12956 RAD51D-216ENST00000588594 1409 ntTSL 216.87■□□□□ 0.291e-7■■■■□ 19.5
XRCC6P12956 FASN-212ENST00000637525 141 ntTSL 516.59■□□□□ 0.251e-7■■■■□ 19.5
XRCC6P12956 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.231e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-211ENST00000596213 929 ntTSL 316.4■□□□□ 0.221e-7■■■■□ 19.5
XRCC6P12956 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.151e-7■■■■□ 19.5
XRCC6P12956 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.87■□□□□ 0.131e-7■■■■□ 19.5
XRCC6P12956 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.021e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-205ENST00000595067 548 ntTSL 414.73□□□□□ -0.051e-7■■■■□ 19.5
XRCC6P12956 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.11e-7■■■■□ 19.5
XRCC6P12956 RAD51D-221ENST00000592577 762 ntTSL 514.33□□□□□ -0.121e-7■■■■□ 19.5
XRCC6P12956 RAD51D-212ENST00000587405 676 ntTSL 514.08□□□□□ -0.161e-7■■■■□ 19.5
XRCC6P12956 GSE1-215ENST00000635906 666 ntTSL 313.97□□□□□ -0.171e-7■■■■□ 19.5
XRCC6P12956 NFATC3-217ENST00000566893 715 ntTSL 213.8□□□□□ -0.21e-7■■■■□ 19.5
XRCC6P12956 RAD51D-215ENST00000588372 2214 ntTSL 513.66□□□□□ -0.221e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-218ENST00000600247 583 ntTSL 413.65□□□□□ -0.221e-7■■■■□ 19.5
XRCC6P12956 HERC1-202ENST00000558324 828 ntTSL 513.23□□□□□ -0.293e-6■■■■□ 19.5
XRCC6P12956 NFATC3-204ENST00000379165 3583 ntTSL 213.12□□□□□ -0.311e-7■■■■□ 19.5
XRCC6P12956 RAD51D-202ENST00000345365 9988 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.341e-7■■■■□ 19.5
XRCC6P12956 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC12.63□□□□□ -0.391e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-213ENST00000597994 470 ntTSL 412.53□□□□□ -0.41e-7■■■■□ 19.5
XRCC6P12956 PPIG-202ENST00000409714 2615 ntTSL 1 (best) BASIC11.57□□□□□ -0.561e-7■■■■□ 19.5
XRCC6P12956 PPIG-211ENST00000530152 690 ntTSL 311.35□□□□□ -0.591e-7■■■■□ 19.5
XRCC6P12956 NFATC3-213ENST00000563319 4122 ntTSL 1 (best)10.54□□□□□ -0.721e-7■■■■□ 19.5
XRCC6P12956 NFATC3-208ENST00000553077 3870 ntTSL 210.53□□□□□ -0.721e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-210ENST00000596195 553 ntTSL 49.4□□□□□ -0.91e-7■■■■□ 19.5
XRCC6P12956 NFATC3-220ENST00000569766 3555 ntTSL 1 (best)9.03□□□□□ -0.961e-7■■■■□ 19.5
XRCC6P12956 NFATC3-207ENST00000549350 3588 ntTSL 28.8□□□□□ -11e-7■■■■□ 19.5
XRCC6P12956 NFATC3-216ENST00000566301 3840 ntTSL 1 (best)8.24□□□□□ -1.091e-7■■■■□ 19.5
XRCC6P12956 NFATC3-211ENST00000562926 3748 ntTSL 1 (best)8.19□□□□□ -1.11e-7■■■■□ 19.5
XRCC6P12956 NFATC3-212ENST00000563288 3790 ntTSL 1 (best)8.1□□□□□ -1.111e-7■■■■□ 19.5
XRCC6P12956 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.121e-7■■■■□ 19.5
XRCC6P12956 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.76□□□□□ -1.171e-7■■■■□ 19.5
XRCC6P12956 NFATC3-218ENST00000567152 3186 ntTSL 1 (best)7.31□□□□□ -1.241e-7■■■■□ 19.5
XRCC6P12956 NFATC3-221ENST00000570212 3181 ntTSL 1 (best)7.16□□□□□ -1.261e-7■■■■□ 19.5
XRCC6P12956 NFATC3-205ENST00000535127 4194 ntTSL 1 (best)6.47□□□□□ -1.371e-7■■■■□ 19.5
XRCC6P12956 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.41e-7■■■■□ 19.5
XRCC6P12956 PPIG-206ENST00000433207 1485 ntTSL 1 (best)5.94□□□□□ -1.461e-7■■■■□ 19.5
XRCC6P12956 NFATC3-214ENST00000563796 3753 ntTSL 1 (best)4.88□□□□□ -1.631e-7■■■■□ 19.5
XRCC6P12956 PPIG-204ENST00000417938 527 ntTSL 54.7□□□□□ -1.661e-7■■■■□ 19.5
XRCC6P12956 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.731e-7■■■■□ 19.5
XRCC6P12956 FNDC3B-206ENST00000443501 678 ntTSL 39.05□□□□□ -0.961e-6■■■■□ 19.5
XRCC6P12956 FNDC3B-209ENST00000478016 554 ntTSL 43.66□□□□□ -1.821e-6■■■■□ 19.5
XRCC6P12956 FAM76B-211ENST00000543641 1379 ntTSL 1 (best)29.9■■■□□ 2.381e-8■■■■□ 19.4
XRCC6P12956 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.411e-8■■■■□ 19.4
XRCC6P12956 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.841e-8■■■■□ 19.4
XRCC6P12956 FAM76B-202ENST00000398187 3823 ntTSL 1 (best)20.22■□□□□ 0.831e-8■■■■□ 19.4
XRCC6P12956 EHBP1-204ENST00000405482 1311 ntTSL 225.14■■□□□ 1.628e-10■■■■□ 19.4
XRCC6P12956 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.079e-6■■■■□ 19.4
XRCC6P12956 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.019e-6■■■■□ 19.4
XRCC6P12956 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC14.56□□□□□ -0.089e-6■■■■□ 19.4
XRCC6P12956 EHBP1-205ENST00000413434 533 ntTSL 411.06□□□□□ -0.648e-10■■■■□ 19.4
XRCC6P12956 EHBP1-211ENST00000449820 539 ntTSL 59.98□□□□□ -0.818e-10■■■■□ 19.4
XRCC6P12956 EHBP1-207ENST00000426940 586 ntTSL 48.57□□□□□ -1.048e-10■■■■□ 19.4
XRCC6P12956 EHBP1-219ENST00000494958 1127 ntTSL 1 (best)5.03□□□□□ -1.68e-10■■■■□ 19.4
XRCC6P12956 KIAA1551-207ENST00000541981 674 ntTSL 215.63■□□□□ 0.091e-6■■■□□ 19.2
XRCC6P12956 KIAA1551-203ENST00000397578 814 ntTSL 37.52□□□□□ -1.211e-6■■■□□ 19.2
XRCC6P12956 KIAA1551-204ENST00000535596 965 ntTSL 27.22□□□□□ -1.251e-6■■■□□ 19.2
XRCC6P12956 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.171e-6■■■□□ 19.2
XRCC6P12956 NOP58-208ENST00000488403 871 ntTSL 216.39■□□□□ 0.215e-22■■■□□ 19.2
XRCC6P12956 NOP58-202ENST00000426814 655 ntTSL 216.04■□□□□ 0.165e-22■■■□□ 19.2
XRCC6P12956 NOP58-205ENST00000472050 582 ntTSL 312.56□□□□□ -0.45e-22■■■□□ 19.2
XRCC6P12956 NOP58-204ENST00000467734 638 ntTSL 512.5□□□□□ -0.415e-22■■■□□ 19.2
XRCC6P12956 NOP58-209ENST00000492688 571 ntTSL 45.16□□□□□ -1.585e-22■■■□□ 19.2
XRCC6P12956 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.041e-10■■■□□ 19.2
XRCC6P12956 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.181e-10■■■□□ 19.2
XRCC6P12956 UBAP2-206ENST00000412543 1349 ntTSL 57.55□□□□□ -1.21e-10■■■□□ 19.2
XRCC6P12956 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.251e-10■■■□□ 19.2
XRCC6P12956 UBAP2-207ENST00000421278 833 ntTSL 56.04□□□□□ -1.441e-10■■■□□ 19.2
XRCC6P12956 USP16-205ENST00000474835 3835 ntTSL 1 (best)5.45□□□□□ -1.541e-10■■■□□ 19.2
XRCC6P12956 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.59□□□□□ -1.844e-9■■■□□ 19.1
XRCC6P12956 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.884e-9■■■□□ 19.1
XRCC6P12956 RICTOR-207ENST00000511516 7312 ntTSL 1 (best)3.06□□□□□ -1.924e-9■■■□□ 19.1
XRCC6P12956 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.623e-8■■■□□ 19.1
XRCC6P12956 GLRX3-203ENST00000481034 1921 ntTSL 1 (best)24.45■■□□□ 1.53e-8■■■□□ 19.1
XRCC6P12956 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.273e-8■■■□□ 19.1
XRCC6P12956 FUBP1-201ENST00000294623 2201 ntTSL 1 (best)18.26■□□□□ 0.512e-11■■■□□ 19
XRCC6P12956 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.352e-11■■■□□ 19
XRCC6P12956 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC14.93□□□□□ -0.022e-11■■■□□ 19
XRCC6P12956 FUBP1-205ENST00000470287 726 ntTSL 33.28□□□□□ -1.882e-11■■■□□ 19
XRCC6P12956 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC28.41■■■□□ 2.143e-6■■■□□ 19
XRCC6P12956 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.92■■□□□ 1.13e-6■■■□□ 19
XRCC6P12956 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.933e-6■■■□□ 19
Retrieved 100 of 6,788 protein–RNA pairs in 91.7 ms