Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.72■■□□□ 1.71
CHRNA1P02708 AC010501.1-201ENST00000606270 1962 ntBASIC25.72■■□□□ 1.71
CHRNA1P02708 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CHRNA1P02708 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHRNA1P02708 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.71■■□□□ 1.71
CHRNA1P02708 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHRNA1P02708 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.71■■□□□ 1.71
CHRNA1P02708 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHRNA1P02708 AC096631.2-201ENST00000436136 790 ntBASIC25.71■■□□□ 1.71
CHRNA1P02708 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHRNA1P02708 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHRNA1P02708 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CHRNA1P02708 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CHRNA1P02708 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHRNA1P02708 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.7■■□□□ 1.7
CHRNA1P02708 MIR6722-201ENST00000617286 78 ntBASIC25.7■■□□□ 1.7
CHRNA1P02708 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHRNA1P02708 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHRNA1P02708 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHRNA1P02708 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHRNA1P02708 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHRNA1P02708 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.69■■□□□ 1.7
CHRNA1P02708 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.69■■□□□ 1.7
CHRNA1P02708 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.69■■□□□ 1.7
CHRNA1P02708 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.69■■□□□ 1.7
CHRNA1P02708 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHRNA1P02708 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHRNA1P02708 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CHRNA1P02708 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CHRNA1P02708 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CHRNA1P02708 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHRNA1P02708 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.68■■□□□ 1.7
CHRNA1P02708 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.67■■□□□ 1.7
CHRNA1P02708 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CHRNA1P02708 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CHRNA1P02708 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.67■■□□□ 1.7
CHRNA1P02708 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.67■■□□□ 1.7
CHRNA1P02708 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHRNA1P02708 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CHRNA1P02708 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHRNA1P02708 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.66■■□□□ 1.7
CHRNA1P02708 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.66■■□□□ 1.7
CHRNA1P02708 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHRNA1P02708 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHRNA1P02708 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.65■■□□□ 1.7
CHRNA1P02708 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CHRNA1P02708 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.65■■□□□ 1.7
CHRNA1P02708 AC005837.3-201ENST00000612163 286 ntBASIC25.65■■□□□ 1.7
CHRNA1P02708 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CHRNA1P02708 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHRNA1P02708 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
CHRNA1P02708 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.64■■□□□ 1.7
CHRNA1P02708 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.64■■□□□ 1.7
CHRNA1P02708 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.64■■□□□ 1.7
CHRNA1P02708 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.64■■□□□ 1.7
CHRNA1P02708 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.63■■□□□ 1.69
CHRNA1P02708 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHRNA1P02708 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHRNA1P02708 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.63■■□□□ 1.69
CHRNA1P02708 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHRNA1P02708 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CHRNA1P02708 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHRNA1P02708 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CHRNA1P02708 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHRNA1P02708 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CHRNA1P02708 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.61■■□□□ 1.69
CHRNA1P02708 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CHRNA1P02708 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHRNA1P02708 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CHRNA1P02708 AC092803.2-201ENST00000564287 1899 ntBASIC25.6■■□□□ 1.69
CHRNA1P02708 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHRNA1P02708 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.6■■□□□ 1.69
CHRNA1P02708 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CHRNA1P02708 AL121749.1-202ENST00000609313 2153 ntBASIC25.6■■□□□ 1.69
CHRNA1P02708 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHRNA1P02708 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHRNA1P02708 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHRNA1P02708 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.59■■□□□ 1.69
CHRNA1P02708 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.59■■□□□ 1.69
CHRNA1P02708 AC133561.4-201ENST00000566112 224 ntBASIC25.59■■□□□ 1.69
CHRNA1P02708 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.59■■□□□ 1.69
CHRNA1P02708 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.59■■□□□ 1.69
CHRNA1P02708 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHRNA1P02708 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CHRNA1P02708 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.58■■□□□ 1.69
CHRNA1P02708 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.58■■□□□ 1.69
CHRNA1P02708 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
CHRNA1P02708 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.57■■□□□ 1.68
CHRNA1P02708 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.57■■□□□ 1.68
CHRNA1P02708 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.57■■□□□ 1.68
CHRNA1P02708 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHRNA1P02708 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHRNA1P02708 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHRNA1P02708 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHRNA1P02708 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHRNA1P02708 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CHRNA1P02708 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CHRNA1P02708 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHRNA1P02708 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHRNA1P02708 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms