Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APOA1P02647 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.71■□□□□ 0.91
APOA1P02647 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOA1P02647 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOA1P02647 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOA1P02647 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOA1P02647 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOA1P02647 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
APOA1P02647 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
APOA1P02647 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOA1P02647 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.7■□□□□ 0.9
APOA1P02647 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.7■□□□□ 0.9
APOA1P02647 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOA1P02647 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOA1P02647 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOA1P02647 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.7■□□□□ 0.9
APOA1P02647 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.69■□□□□ 0.9
APOA1P02647 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
APOA1P02647 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
APOA1P02647 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.69■□□□□ 0.9
APOA1P02647 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
APOA1P02647 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.69■□□□□ 0.9
APOA1P02647 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.69■□□□□ 0.9
APOA1P02647 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOA1P02647 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
APOA1P02647 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOA1P02647 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.68■□□□□ 0.9
APOA1P02647 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.68■□□□□ 0.9
APOA1P02647 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOA1P02647 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOA1P02647 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOA1P02647 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
APOA1P02647 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
APOA1P02647 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
APOA1P02647 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA1P02647 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOA1P02647 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOA1P02647 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOA1P02647 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
APOA1P02647 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.66■□□□□ 0.9
APOA1P02647 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOA1P02647 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOA1P02647 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOA1P02647 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOA1P02647 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOA1P02647 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOA1P02647 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
APOA1P02647 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOA1P02647 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOA1P02647 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
APOA1P02647 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOA1P02647 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.65■□□□□ 0.9
APOA1P02647 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.65■□□□□ 0.9
APOA1P02647 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOA1P02647 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOA1P02647 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOA1P02647 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.65■□□□□ 0.9
APOA1P02647 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOA1P02647 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.65■□□□□ 0.9
APOA1P02647 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
APOA1P02647 EP400NL-214ENST00000641289 2402 ntBASIC20.64■□□□□ 0.89
APOA1P02647 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.64■□□□□ 0.89
APOA1P02647 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOA1P02647 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APOA1P02647 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APOA1P02647 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOA1P02647 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOA1P02647 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOA1P02647 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.63■□□□□ 0.89
APOA1P02647 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
APOA1P02647 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.63■□□□□ 0.89
APOA1P02647 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APOA1P02647 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOA1P02647 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.63■□□□□ 0.89
APOA1P02647 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOA1P02647 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms