Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLPTM1O96005 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLPTM1O96005 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.88■■□□□ 1.09
CLPTM1O96005 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CLPTM1O96005 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLPTM1O96005 AC110285.7-201ENST00000624417 1536 ntBASIC21.87■■□□□ 1.09
CLPTM1O96005 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.87■■□□□ 1.09
CLPTM1O96005 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLPTM1O96005 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLPTM1O96005 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.86■■□□□ 1.09
CLPTM1O96005 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLPTM1O96005 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLPTM1O96005 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.86■■□□□ 1.09
CLPTM1O96005 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLPTM1O96005 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLPTM1O96005 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.85■■□□□ 1.09
CLPTM1O96005 AC233723.2-201ENST00000623798 2106 ntBASIC21.85■■□□□ 1.09
CLPTM1O96005 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLPTM1O96005 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLPTM1O96005 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLPTM1O96005 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLPTM1O96005 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLPTM1O96005 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CLPTM1O96005 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLPTM1O96005 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLPTM1O96005 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.84■■□□□ 1.09
CLPTM1O96005 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLPTM1O96005 MIR639-201ENST00000384974 98 ntBASIC21.84■■□□□ 1.09
CLPTM1O96005 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLPTM1O96005 AC004812.2-201ENST00000611079 2094 ntBASIC21.84■■□□□ 1.09
CLPTM1O96005 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
CLPTM1O96005 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.84■■□□□ 1.09
CLPTM1O96005 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLPTM1O96005 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CLPTM1O96005 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLPTM1O96005 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLPTM1O96005 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CLPTM1O96005 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLPTM1O96005 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLPTM1O96005 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLPTM1O96005 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CLPTM1O96005 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLPTM1O96005 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.82■■□□□ 1.08
CLPTM1O96005 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLPTM1O96005 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLPTM1O96005 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CLPTM1O96005 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.81■■□□□ 1.08
CLPTM1O96005 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLPTM1O96005 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.81■■□□□ 1.08
CLPTM1O96005 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLPTM1O96005 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.81■■□□□ 1.08
CLPTM1O96005 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLPTM1O96005 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.8■■□□□ 1.08
CLPTM1O96005 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLPTM1O96005 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLPTM1O96005 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CLPTM1O96005 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.8■■□□□ 1.08
CLPTM1O96005 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLPTM1O96005 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLPTM1O96005 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLPTM1O96005 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CLPTM1O96005 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLPTM1O96005 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLPTM1O96005 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.79■■□□□ 1.08
CLPTM1O96005 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLPTM1O96005 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.79■■□□□ 1.08
CLPTM1O96005 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLPTM1O96005 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLPTM1O96005 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLPTM1O96005 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPTM1O96005 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPTM1O96005 C1orf229-201ENST00000623686 2258 ntBASIC21.78■■□□□ 1.08
CLPTM1O96005 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CLPTM1O96005 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CLPTM1O96005 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPTM1O96005 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.78■■□□□ 1.08
CLPTM1O96005 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPTM1O96005 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLPTM1O96005 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLPTM1O96005 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLPTM1O96005 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPTM1O96005 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.78■■□□□ 1.08
CLPTM1O96005 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
CLPTM1O96005 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLPTM1O96005 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLPTM1O96005 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.77■■□□□ 1.08
CLPTM1O96005 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.76■■□□□ 1.07
CLPTM1O96005 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLPTM1O96005 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPTM1O96005 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPTM1O96005 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPTM1O96005 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CLPTM1O96005 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPTM1O96005 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPTM1O96005 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPTM1O96005 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLPTM1O96005 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.75■■□□□ 1.07
CLPTM1O96005 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.75■■□□□ 1.07
CLPTM1O96005 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLPTM1O96005 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms