Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SIX6O95475 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.48■□□□□ 0.71
SIX6O95475 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SIX6O95475 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.48■□□□□ 0.71
SIX6O95475 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SIX6O95475 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.48■□□□□ 0.71
SIX6O95475 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX6O95475 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX6O95475 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.47■□□□□ 0.71
SIX6O95475 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX6O95475 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SIX6O95475 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.47■□□□□ 0.71
SIX6O95475 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SIX6O95475 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX6O95475 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX6O95475 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SIX6O95475 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX6O95475 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIX6O95475 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX6O95475 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIX6O95475 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX6O95475 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX6O95475 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIX6O95475 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
SIX6O95475 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SIX6O95475 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX6O95475 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SIX6O95475 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX6O95475 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX6O95475 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIX6O95475 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIX6O95475 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX6O95475 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX6O95475 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIX6O95475 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
SIX6O95475 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX6O95475 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX6O95475 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX6O95475 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.45■□□□□ 0.7
SIX6O95475 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX6O95475 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX6O95475 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.45■□□□□ 0.7
SIX6O95475 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX6O95475 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX6O95475 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SIX6O95475 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX6O95475 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SIX6O95475 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX6O95475 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.44■□□□□ 0.7
SIX6O95475 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.44■□□□□ 0.7
SIX6O95475 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SIX6O95475 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX6O95475 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX6O95475 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX6O95475 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.43■□□□□ 0.7
SIX6O95475 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX6O95475 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX6O95475 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX6O95475 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SIX6O95475 AC005559.1-201ENST00000589661 871 ntBASIC19.43■□□□□ 0.7
SIX6O95475 AC007375.3-201ENST00000600936 2314 ntBASIC19.43■□□□□ 0.7
SIX6O95475 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX6O95475 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SIX6O95475 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX6O95475 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX6O95475 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX6O95475 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.42■□□□□ 0.7
SIX6O95475 PKD1P6-201ENST00000343738 4769 ntBASIC19.42■□□□□ 0.7
SIX6O95475 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.42■□□□□ 0.7
SIX6O95475 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SIX6O95475 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX6O95475 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX6O95475 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SIX6O95475 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SIX6O95475 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.41■□□□□ 0.7
SIX6O95475 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX6O95475 C1orf229-201ENST00000623686 2258 ntBASIC19.41■□□□□ 0.7
SIX6O95475 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX6O95475 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.41■□□□□ 0.7
SIX6O95475 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX6O95475 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX6O95475 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIX6O95475 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.41■□□□□ 0.7
SIX6O95475 AC136428.2-201ENST00000563187 214 ntBASIC19.41■□□□□ 0.7
SIX6O95475 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SIX6O95475 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.41■□□□□ 0.7
SIX6O95475 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX6O95475 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SIX6O95475 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SIX6O95475 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX6O95475 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX6O95475 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.4■□□□□ 0.7
SIX6O95475 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.4■□□□□ 0.7
SIX6O95475 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.4■□□□□ 0.7
SIX6O95475 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIX6O95475 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIX6O95475 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.4■□□□□ 0.7
SIX6O95475 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIX6O95475 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX6O95475 SLC25A24-204ENST00000569674 2357 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms