Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.01■□□□□ 0.95
PFDN1O60925 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
PFDN1O60925 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21■□□□□ 0.95
PFDN1O60925 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PFDN1O60925 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PFDN1O60925 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PFDN1O60925 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PFDN1O60925 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PFDN1O60925 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PFDN1O60925 AC073130.3-201ENST00000624389 2278 ntBASIC21■□□□□ 0.95
PFDN1O60925 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21■□□□□ 0.95
PFDN1O60925 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21■□□□□ 0.95
PFDN1O60925 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PFDN1O60925 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PFDN1O60925 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PFDN1O60925 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.99■□□□□ 0.95
PFDN1O60925 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PFDN1O60925 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PFDN1O60925 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.99■□□□□ 0.95
PFDN1O60925 LINC00526-201ENST00000581067 1875 ntBASIC20.99■□□□□ 0.95
PFDN1O60925 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PFDN1O60925 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.99■□□□□ 0.95
PFDN1O60925 AL391422.3-201ENST00000603791 2761 ntBASIC20.99■□□□□ 0.95
PFDN1O60925 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.99■□□□□ 0.95
PFDN1O60925 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PFDN1O60925 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PFDN1O60925 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PFDN1O60925 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PFDN1O60925 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PFDN1O60925 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.98■□□□□ 0.95
PFDN1O60925 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PFDN1O60925 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.98■□□□□ 0.95
PFDN1O60925 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
PFDN1O60925 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PFDN1O60925 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PFDN1O60925 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PFDN1O60925 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PFDN1O60925 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
PFDN1O60925 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PFDN1O60925 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PFDN1O60925 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PFDN1O60925 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PFDN1O60925 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PFDN1O60925 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PFDN1O60925 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PFDN1O60925 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PFDN1O60925 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PFDN1O60925 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PFDN1O60925 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.96■□□□□ 0.95
PFDN1O60925 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.96■□□□□ 0.95
PFDN1O60925 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PFDN1O60925 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PFDN1O60925 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
PFDN1O60925 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN1O60925 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN1O60925 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.95■□□□□ 0.94
PFDN1O60925 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN1O60925 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN1O60925 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN1O60925 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PFDN1O60925 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.95■□□□□ 0.94
PFDN1O60925 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PFDN1O60925 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN1O60925 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN1O60925 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN1O60925 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PFDN1O60925 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN1O60925 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PFDN1O60925 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN1O60925 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN1O60925 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PFDN1O60925 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
PFDN1O60925 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PFDN1O60925 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
PFDN1O60925 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN1O60925 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN1O60925 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.93■□□□□ 0.94
PFDN1O60925 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN1O60925 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN1O60925 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN1O60925 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN1O60925 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.93■□□□□ 0.94
PFDN1O60925 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.93■□□□□ 0.94
PFDN1O60925 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN1O60925 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN1O60925 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.92■□□□□ 0.94
PFDN1O60925 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN1O60925 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN1O60925 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.92■□□□□ 0.94
PFDN1O60925 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PFDN1O60925 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN1O60925 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.92■□□□□ 0.94
PFDN1O60925 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN1O60925 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN1O60925 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN1O60925 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN1O60925 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PFDN1O60925 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PFDN1O60925 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PFDN1O60925 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms