Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRAMEF2O60811 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF2O60811 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF2O60811 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF2O60811 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF2O60811 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF2O60811 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
PRAMEF2O60811 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF2O60811 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF2O60811 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF2O60811 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.91■■□□□ 1.1
PRAMEF2O60811 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF2O60811 AC131212.1-201ENST00000613771 668 ntBASIC21.91■■□□□ 1.1
PRAMEF2O60811 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PRAMEF2O60811 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF2O60811 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PRAMEF2O60811 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF2O60811 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.9■■□□□ 1.1
PRAMEF2O60811 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PRAMEF2O60811 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF2O60811 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.89■■□□□ 1.09
PRAMEF2O60811 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF2O60811 THA1P-201ENST00000590384 1145 ntBASIC21.89■■□□□ 1.09
PRAMEF2O60811 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PRAMEF2O60811 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF2O60811 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.09
PRAMEF2O60811 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF2O60811 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF2O60811 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF2O60811 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PRAMEF2O60811 KRT18P24-201ENST00000344739 1156 ntBASIC21.88■■□□□ 1.09
PRAMEF2O60811 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.88■■□□□ 1.09
PRAMEF2O60811 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.88■■□□□ 1.09
PRAMEF2O60811 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.88■■□□□ 1.09
PRAMEF2O60811 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF2O60811 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF2O60811 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.87■■□□□ 1.09
PRAMEF2O60811 AL356441.2-201ENST00000443009 864 ntBASIC21.87■■□□□ 1.09
PRAMEF2O60811 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
PRAMEF2O60811 MIR6089-201ENST00000616698 64 ntBASIC21.87■■□□□ 1.09
PRAMEF2O60811 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEF2O60811 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEF2O60811 BX664725.1-201ENST00000438252 379 ntBASIC21.86■■□□□ 1.09
PRAMEF2O60811 KRT125P-201ENST00000546827 989 ntBASIC21.86■■□□□ 1.09
PRAMEF2O60811 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEF2O60811 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEF2O60811 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.86■■□□□ 1.09
PRAMEF2O60811 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF2O60811 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF2O60811 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF2O60811 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF2O60811 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PRAMEF2O60811 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.85■■□□□ 1.09
PRAMEF2O60811 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.85■■□□□ 1.09
PRAMEF2O60811 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF2O60811 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF2O60811 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.85■■□□□ 1.09
PRAMEF2O60811 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF2O60811 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.84■■□□□ 1.09
PRAMEF2O60811 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.84■■□□□ 1.09
PRAMEF2O60811 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEF2O60811 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.84■■□□□ 1.09
PRAMEF2O60811 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.84■■□□□ 1.09
PRAMEF2O60811 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEF2O60811 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.84■■□□□ 1.09
PRAMEF2O60811 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEF2O60811 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PRAMEF2O60811 AP003733.4-201ENST00000623785 1697 ntBASIC21.84■■□□□ 1.09
PRAMEF2O60811 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEF2O60811 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.84■■□□□ 1.09
PRAMEF2O60811 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PRAMEF2O60811 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEF2O60811 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEF2O60811 AC138932.3-201ENST00000567634 1902 ntBASIC21.83■■□□□ 1.09
PRAMEF2O60811 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEF2O60811 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PRAMEF2O60811 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PRAMEF2O60811 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
PRAMEF2O60811 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.83■■□□□ 1.09
PRAMEF2O60811 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEF2O60811 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRAMEF2O60811 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.82■■□□□ 1.08
PRAMEF2O60811 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF2O60811 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.82■■□□□ 1.08
PRAMEF2O60811 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF2O60811 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PRAMEF2O60811 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.82■■□□□ 1.08
PRAMEF2O60811 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF2O60811 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF2O60811 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.82■■□□□ 1.08
PRAMEF2O60811 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
PRAMEF2O60811 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.82■■□□□ 1.08
PRAMEF2O60811 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEF2O60811 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF2O60811 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PRAMEF2O60811 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.81■■□□□ 1.08
PRAMEF2O60811 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.81■■□□□ 1.08
PRAMEF2O60811 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF2O60811 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PRAMEF2O60811 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms