Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 Z92544.1-202ENST00000571933 1220 ntBASIC24.77■■□□□ 1.56
CLDN5O00501 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.77■■□□□ 1.56
CLDN5O00501 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.77■■□□□ 1.56
CLDN5O00501 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CLDN5O00501 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLDN5O00501 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
CLDN5O00501 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLDN5O00501 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CLDN5O00501 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLDN5O00501 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
CLDN5O00501 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CLDN5O00501 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLDN5O00501 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLDN5O00501 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLDN5O00501 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLDN5O00501 AF131216.4-201ENST00000638924 1588 ntBASIC24.75■■□□□ 1.55
CLDN5O00501 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CLDN5O00501 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CLDN5O00501 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLDN5O00501 KRT125P-201ENST00000546827 989 ntBASIC24.74■■□□□ 1.55
CLDN5O00501 MIR4787-201ENST00000607364 84 ntBASIC24.74■■□□□ 1.55
CLDN5O00501 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CLDN5O00501 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CLDN5O00501 AC022211.4-201ENST00000625094 2161 ntBASIC24.73■■□□□ 1.55
CLDN5O00501 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CLDN5O00501 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.73■■□□□ 1.55
CLDN5O00501 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.73■■□□□ 1.55
CLDN5O00501 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CLDN5O00501 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.73■■□□□ 1.55
CLDN5O00501 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.73■■□□□ 1.55
CLDN5O00501 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.73■■□□□ 1.55
CLDN5O00501 AC020928.2-201ENST00000588717 2197 ntBASIC24.73■■□□□ 1.55
CLDN5O00501 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLDN5O00501 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLDN5O00501 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.72■■□□□ 1.55
CLDN5O00501 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.72■■□□□ 1.55
CLDN5O00501 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLDN5O00501 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CLDN5O00501 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLDN5O00501 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLDN5O00501 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CLDN5O00501 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.71■■□□□ 1.55
CLDN5O00501 AC021242.3-201ENST00000607598 1377 ntBASIC24.71■■□□□ 1.55
CLDN5O00501 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLDN5O00501 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CLDN5O00501 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.71■■□□□ 1.55
CLDN5O00501 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.71■■□□□ 1.55
CLDN5O00501 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.71■■□□□ 1.55
CLDN5O00501 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.71■■□□□ 1.55
CLDN5O00501 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLDN5O00501 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
CLDN5O00501 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CLDN5O00501 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLDN5O00501 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CLDN5O00501 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.7■■□□□ 1.54
CLDN5O00501 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
CLDN5O00501 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLDN5O00501 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLDN5O00501 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CLDN5O00501 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.69■■□□□ 1.54
CLDN5O00501 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CLDN5O00501 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLDN5O00501 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLDN5O00501 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.69■■□□□ 1.54
CLDN5O00501 MIR6089-201ENST00000616698 64 ntBASIC24.69■■□□□ 1.54
CLDN5O00501 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLDN5O00501 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.69■■□□□ 1.54
CLDN5O00501 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CLDN5O00501 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLDN5O00501 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.68■■□□□ 1.54
CLDN5O00501 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.68■■□□□ 1.54
CLDN5O00501 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLDN5O00501 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.68■■□□□ 1.54
CLDN5O00501 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
CLDN5O00501 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.68■■□□□ 1.54
CLDN5O00501 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.68■■□□□ 1.54
CLDN5O00501 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLDN5O00501 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLDN5O00501 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.67■■□□□ 1.54
CLDN5O00501 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CLDN5O00501 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.67■■□□□ 1.54
CLDN5O00501 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLDN5O00501 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.66■■□□□ 1.54
CLDN5O00501 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLDN5O00501 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.66■■□□□ 1.54
CLDN5O00501 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLDN5O00501 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CLDN5O00501 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.66■■□□□ 1.54
CLDN5O00501 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.66■■□□□ 1.54
CLDN5O00501 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLDN5O00501 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLDN5O00501 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
CLDN5O00501 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLDN5O00501 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.64■■□□□ 1.54
CLDN5O00501 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.64■■□□□ 1.54
CLDN5O00501 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
CLDN5O00501 TSPY9P-201ENST00000440215 945 ntBASIC24.64■■□□□ 1.54
CLDN5O00501 TSPY11P-201ENST00000442607 1045 ntBASIC24.64■■□□□ 1.54
CLDN5O00501 UNC93B8-201ENST00000511903 705 ntBASIC24.64■■□□□ 1.54
CLDN5O00501 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms