Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01546A6NGU7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01546A6NGU7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01546A6NGU7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC01546A6NGU7 DUSP8P3-201ENST00000399571 1760 ntBASIC16.61■□□□□ 0.25
LINC01546A6NGU7 HLA-L-211ENST00000482052 1765 ntBASIC16.61■□□□□ 0.25
LINC01546A6NGU7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01546A6NGU7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01546A6NGU7 GUSBP5-202ENST00000510805 1989 ntBASIC16.61■□□□□ 0.25
LINC01546A6NGU7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01546A6NGU7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01546A6NGU7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC01546A6NGU7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01546A6NGU7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01546A6NGU7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.6■□□□□ 0.25
LINC01546A6NGU7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01546A6NGU7 C1orf229-201ENST00000623686 2258 ntBASIC16.59■□□□□ 0.25
LINC01546A6NGU7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LINC01546A6NGU7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01546A6NGU7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01546A6NGU7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01546A6NGU7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01546A6NGU7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01546A6NGU7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01546A6NGU7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01546A6NGU7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01546A6NGU7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.59■□□□□ 0.25
LINC01546A6NGU7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.59■□□□□ 0.25
LINC01546A6NGU7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01546A6NGU7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.58■□□□□ 0.25
LINC01546A6NGU7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LINC01546A6NGU7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01546A6NGU7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01546A6NGU7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01546A6NGU7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01546A6NGU7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01546A6NGU7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01546A6NGU7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01546A6NGU7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01546A6NGU7 AC092068.2-201ENST00000590491 1708 ntBASIC16.57■□□□□ 0.24
LINC01546A6NGU7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01546A6NGU7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01546A6NGU7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.57■□□□□ 0.24
LINC01546A6NGU7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.57■□□□□ 0.24
LINC01546A6NGU7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.57■□□□□ 0.24
LINC01546A6NGU7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01546A6NGU7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01546A6NGU7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01546A6NGU7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01546A6NGU7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01546A6NGU7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01546A6NGU7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01546A6NGU7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01546A6NGU7 ANOS2P-203ENST00000472227 1816 ntBASIC16.56■□□□□ 0.24
LINC01546A6NGU7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.55■□□□□ 0.24
LINC01546A6NGU7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01546A6NGU7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01546A6NGU7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01546A6NGU7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC01546A6NGU7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01546A6NGU7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.54■□□□□ 0.24
LINC01546A6NGU7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01546A6NGU7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC01546A6NGU7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01546A6NGU7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01546A6NGU7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01546A6NGU7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01546A6NGU7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01546A6NGU7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01546A6NGU7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
LINC01546A6NGU7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01546A6NGU7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LINC01546A6NGU7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01546A6NGU7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01546A6NGU7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.53■□□□□ 0.24
LINC01546A6NGU7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms