Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHISA3A0PJX4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHISA3A0PJX4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SHISA3A0PJX4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.44■□□□□ 0.86
SHISA3A0PJX4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.44■□□□□ 0.86
SHISA3A0PJX4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHISA3A0PJX4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHISA3A0PJX4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.44■□□□□ 0.86
SHISA3A0PJX4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SHISA3A0PJX4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.44■□□□□ 0.86
SHISA3A0PJX4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.44■□□□□ 0.86
SHISA3A0PJX4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHISA3A0PJX4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHISA3A0PJX4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA3A0PJX4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA3A0PJX4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA3A0PJX4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.43■□□□□ 0.86
SHISA3A0PJX4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.43■□□□□ 0.86
SHISA3A0PJX4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.43■□□□□ 0.86
SHISA3A0PJX4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA3A0PJX4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA3A0PJX4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA3A0PJX4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA3A0PJX4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHISA3A0PJX4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.41■□□□□ 0.86
SHISA3A0PJX4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHISA3A0PJX4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHISA3A0PJX4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHISA3A0PJX4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.4■□□□□ 0.86
SHISA3A0PJX4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SHISA3A0PJX4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHISA3A0PJX4 LINC00565-201ENST00000562710 2331 ntBASIC20.39■□□□□ 0.86
SHISA3A0PJX4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SHISA3A0PJX4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SHISA3A0PJX4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SHISA3A0PJX4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHISA3A0PJX4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHISA3A0PJX4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHISA3A0PJX4 AC233723.2-201ENST00000623798 2106 ntBASIC20.39■□□□□ 0.85
SHISA3A0PJX4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHISA3A0PJX4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHISA3A0PJX4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHISA3A0PJX4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHISA3A0PJX4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHISA3A0PJX4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHISA3A0PJX4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SHISA3A0PJX4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SHISA3A0PJX4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHISA3A0PJX4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHISA3A0PJX4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.37■□□□□ 0.85
SHISA3A0PJX4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHISA3A0PJX4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHISA3A0PJX4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.37■□□□□ 0.85
SHISA3A0PJX4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SHISA3A0PJX4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHISA3A0PJX4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SHISA3A0PJX4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHISA3A0PJX4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHISA3A0PJX4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SHISA3A0PJX4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.36■□□□□ 0.85
SHISA3A0PJX4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.36■□□□□ 0.85
SHISA3A0PJX4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SHISA3A0PJX4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHISA3A0PJX4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHISA3A0PJX4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.36■□□□□ 0.85
SHISA3A0PJX4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHISA3A0PJX4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SHISA3A0PJX4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHISA3A0PJX4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SHISA3A0PJX4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SHISA3A0PJX4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.35■□□□□ 0.85
SHISA3A0PJX4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHISA3A0PJX4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SHISA3A0PJX4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHISA3A0PJX4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.35■□□□□ 0.85
SHISA3A0PJX4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SHISA3A0PJX4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHISA3A0PJX4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SHISA3A0PJX4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SHISA3A0PJX4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.34■□□□□ 0.85
SHISA3A0PJX4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHISA3A0PJX4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHISA3A0PJX4 RPS2P35-201ENST00000443417 897 ntBASIC20.34■□□□□ 0.85
SHISA3A0PJX4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.34■□□□□ 0.85
SHISA3A0PJX4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SHISA3A0PJX4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHISA3A0PJX4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHISA3A0PJX4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms