Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM27A0A1W2PRY6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SMIM27A0A1W2PRY6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM27A0A1W2PRY6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM27A0A1W2PRY6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM27A0A1W2PRY6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM27A0A1W2PRY6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM27A0A1W2PRY6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM27A0A1W2PRY6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM27A0A1W2PRY6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM27A0A1W2PRY6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 AC136428.2-201ENST00000563187 214 ntBASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM27A0A1W2PRY6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
SMIM27A0A1W2PRY6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM27A0A1W2PRY6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM27A0A1W2PRY6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.45■□□□□ 0.38
SMIM27A0A1W2PRY6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM27A0A1W2PRY6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM27A0A1W2PRY6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM27A0A1W2PRY6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM27A0A1W2PRY6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM27A0A1W2PRY6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.45■□□□□ 0.38
SMIM27A0A1W2PRY6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM27A0A1W2PRY6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM27A0A1W2PRY6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM27A0A1W2PRY6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM27A0A1W2PRY6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM27A0A1W2PRY6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM27A0A1W2PRY6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SMIM27A0A1W2PRY6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM27A0A1W2PRY6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.43■□□□□ 0.38
SMIM27A0A1W2PRY6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
SMIM27A0A1W2PRY6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM27A0A1W2PRY6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.43■□□□□ 0.38
SMIM27A0A1W2PRY6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM27A0A1W2PRY6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM27A0A1W2PRY6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM27A0A1W2PRY6 C1orf229-201ENST00000623686 2258 ntBASIC17.42■□□□□ 0.38
SMIM27A0A1W2PRY6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SMIM27A0A1W2PRY6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SMIM27A0A1W2PRY6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.42■□□□□ 0.38
SMIM27A0A1W2PRY6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.42■□□□□ 0.38
SMIM27A0A1W2PRY6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM27A0A1W2PRY6 AL359504.2-201ENST00000605506 1601 ntBASIC17.42■□□□□ 0.38
SMIM27A0A1W2PRY6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.42■□□□□ 0.38
SMIM27A0A1W2PRY6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM27A0A1W2PRY6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SMIM27A0A1W2PRY6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM27A0A1W2PRY6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM27A0A1W2PRY6 GUSBP5-202ENST00000510805 1989 ntBASIC17.4■□□□□ 0.38
SMIM27A0A1W2PRY6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM27A0A1W2PRY6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SMIM27A0A1W2PRY6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMIM27A0A1W2PRY6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM27A0A1W2PRY6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM27A0A1W2PRY6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM27A0A1W2PRY6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM27A0A1W2PRY6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.39■□□□□ 0.37
SMIM27A0A1W2PRY6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMIM27A0A1W2PRY6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM27A0A1W2PRY6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM27A0A1W2PRY6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM27A0A1W2PRY6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SMIM27A0A1W2PRY6 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms