Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 AC092865.5-201ENST00000545435 363 ntBASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 KRT19P2-202ENST00000557173 1012 ntBASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 MTDHP5-201ENST00000598980 586 ntBASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 AL671883.3-201ENST00000603274 991 ntBASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 AC020658.6-201ENST00000623564 1870 ntBASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 PCDHA3-202ENST00000532566 4594 ntBASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 AC074386.1-202ENST00000463561 864 ntBASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 MPDU1-223ENST00000582151 728 ntBASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.17■□□□□ 0.5
R3HCC1Q9Y3T6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 BX842568.4-201ENST00000421222 227 ntBASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 PDPK2P-202ENST00000562415 1191 ntBASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms