Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 HAUS4P1-201ENST00000406739 1145 ntBASIC15.07■□□□□ 0
LRCH1Q9Y2L9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 KRT126P-201ENST00000549467 1181 ntBASIC15.07■□□□□ 0
LRCH1Q9Y2L9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 MPDU1-223ENST00000582151 728 ntBASIC15.07■□□□□ 0
LRCH1Q9Y2L9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 AC124864.1-201ENST00000623408 392 ntBASIC15.07■□□□□ 0
LRCH1Q9Y2L9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 AC243591.1-201ENST00000452967 1364 ntBASIC15.07■□□□□ 0
LRCH1Q9Y2L9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 AC011474.4-201ENST00000623523 2076 ntBASIC15.07■□□□□ 0
LRCH1Q9Y2L9 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 AC246785.2-201ENST00000432512 513 ntBASIC15.06■□□□□ 0
LRCH1Q9Y2L9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 DUSP5P1-201ENST00000441325 1139 ntBASIC15.06■□□□□ 0
LRCH1Q9Y2L9 AC104819.1-201ENST00000504587 486 ntBASIC15.06■□□□□ 0
LRCH1Q9Y2L9 AP000867.3-201ENST00000524675 377 ntBASIC15.06■□□□□ 0
LRCH1Q9Y2L9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH1Q9Y2L9 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
LRCH1Q9Y2L9 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRCH1Q9Y2L9 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRCH1Q9Y2L9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRCH1Q9Y2L9 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.05■□□□□ 0
LRCH1Q9Y2L9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
LRCH1Q9Y2L9 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRCH1Q9Y2L9 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.05■□□□□ 0
LRCH1Q9Y2L9 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.05■□□□□ 0
LRCH1Q9Y2L9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
LRCH1Q9Y2L9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms