Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 MTDHP5-201ENST00000598980 586 ntBASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HHLA3Q9XRX5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 FAM86C2P-203ENST00000528684 1004 ntBASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.6□□□□□ -0.55
HHLA3Q9XRX5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms