Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 BNIP3P42-201ENST00000454982 569 ntBASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 BNIP3P29-201ENST00000598302 571 ntBASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 AC011447.5-201ENST00000616168 564 ntBASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.9□□□□□ -0.19
KIAA1549Q9HCM3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 PAUPAR-201ENST00000630360 2965 ntBASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 AC105917.1-201ENST00000506637 2539 ntBASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 SSR4P1-203ENST00000599569 2260 ntBASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 AC093433.1-201ENST00000458048 571 ntBASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 AP005482.1-201ENST00000563722 1273 ntBASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 AC020658.6-201ENST00000623564 1870 ntBASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
KIAA1549Q9HCM3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms