Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 AC093726.1-201ENST00000608064 963 ntBASIC18.52■□□□□ 0.56
RNF41Q9H4P4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.52■□□□□ 0.56
RNF41Q9H4P4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
RNF41Q9H4P4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF41Q9H4P4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF41Q9H4P4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF41Q9H4P4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF41Q9H4P4 CLK3P2-201ENST00000427566 1453 ntBASIC18.52■□□□□ 0.55
RNF41Q9H4P4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF41Q9H4P4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 AC104596.2-201ENST00000512793 793 ntBASIC18.51■□□□□ 0.55
RNF41Q9H4P4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 AC140912.1-201ENST00000577171 1054 ntBASIC18.51■□□□□ 0.55
RNF41Q9H4P4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNF41Q9H4P4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 FAM86LP-201ENST00000478302 853 ntBASIC18.5■□□□□ 0.55
RNF41Q9H4P4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 SPDYE22P-201ENST00000582158 798 ntBASIC18.5■□□□□ 0.55
RNF41Q9H4P4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.5■□□□□ 0.55
RNF41Q9H4P4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF41Q9H4P4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms