Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 REXO1L1P-202ENST00000608646 1974 ntBASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 UPF3AP3-201ENST00000420996 769 ntBASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 CICP13-201ENST00000422015 2789 ntBASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC68Q9H2F9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 FAM45BP-202ENST00000592932 1624 ntBASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 AC004461.1-201ENST00000412461 403 ntBASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 AL627223.1-201ENST00000416693 442 ntBASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 ALG1L8P-201ENST00000533887 760 ntBASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 AC092865.5-201ENST00000545435 363 ntBASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 AL136982.4-201ENST00000437689 1740 ntBASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.87■□□□□ 0.13
CCDC68Q9H2F9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms