Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 AC104596.2-201ENST00000512793 793 ntBASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 AL132655.2-201ENST00000596276 594 ntBASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 AC063926.3-201ENST00000624734 5658 ntBASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 AC008894.3-201ENST00000624324 3103 ntBASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AC007541.1-201ENST00000570282 1469 ntBASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AC023310.3-201ENST00000557027 670 ntBASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AC100756.1-201ENST00000562736 682 ntBASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AC138749.3-201ENST00000567691 622 ntBASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AC027307.3-201ENST00000594262 1100 ntBASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AC093726.1-201ENST00000608064 963 ntBASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AL391069.4-201ENST00000609583 481 ntBASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 AC116165.1-201ENST00000611806 668 ntBASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM62Q9BVG3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 MIR661-201ENST00000384842 89 ntBASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM62Q9BVG3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms