Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 REXO1L8P-201ENST00000604378 1897 ntBASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 TSPY16P-201ENST00000449843 468 ntBASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 AL122018.1-201ENST00000446607 2310 ntBASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
PCGF1Q9BSM1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 MIR600HG-201ENST00000449175 5984 ntBASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 MIR648-201ENST00000385046 94 ntBASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 HLA-V-204ENST00000476601 1289 ntBASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 AC061975.2-201ENST00000581722 295 ntBASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 AL590560.3-201ENST00000623350 461 ntBASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.3□□□□□ -0.28
PCGF1Q9BSM1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms