Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HAPLN3Q96S86 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.31■□□□□ 0.2
HAPLN3Q96S86 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HAPLN3Q96S86 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HAPLN3Q96S86 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
HAPLN3Q96S86 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
HAPLN3Q96S86 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HAPLN3Q96S86 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HAPLN3Q96S86 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.31■□□□□ 0.2
HAPLN3Q96S86 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HAPLN3Q96S86 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 KRT18P64-201ENST00000434946 1219 ntBASIC16.3■□□□□ 0.2
HAPLN3Q96S86 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.3■□□□□ 0.2
HAPLN3Q96S86 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.3■□□□□ 0.2
HAPLN3Q96S86 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.3■□□□□ 0.2
HAPLN3Q96S86 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.3■□□□□ 0.2
HAPLN3Q96S86 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.3■□□□□ 0.2
HAPLN3Q96S86 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 MEIS3P1-201ENST00000495167 958 ntBASIC16.29■□□□□ 0.2
HAPLN3Q96S86 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 SPDYE18-201ENST00000510091 1050 ntBASIC16.29■□□□□ 0.2
HAPLN3Q96S86 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 AC092364.2-202ENST00000597012 1073 ntBASIC16.29■□□□□ 0.2
HAPLN3Q96S86 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 CICP13-201ENST00000422015 2789 ntBASIC16.29■□□□□ 0.2
HAPLN3Q96S86 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HAPLN3Q96S86 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms