Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.85■□□□□ 0.45
SYNGAP1Q96PV0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 AC007551.1-201ENST00000457394 519 ntBASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 RN7SL219P-201ENST00000582872 296 ntBASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 AC005252.2-201ENST00000624630 1141 ntBASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 AL662844.4-201ENST00000606367 2838 ntBASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.84■□□□□ 0.45
SYNGAP1Q96PV0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SYNGAP1Q96PV0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
SYNGAP1Q96PV0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SYNGAP1Q96PV0 AC046158.3-201ENST00000624947 2558 ntBASIC17.83■□□□□ 0.45
SYNGAP1Q96PV0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SYNGAP1Q96PV0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SYNGAP1Q96PV0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SYNGAP1Q96PV0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.83■□□□□ 0.45
SYNGAP1Q96PV0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SYNGAP1Q96PV0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SYNGAP1Q96PV0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 AL121723.1-201ENST00000445194 1519 ntBASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNGAP1Q96PV0 AC134312.5-201ENST00000568031 1313 ntBASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms