Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 AL353779.1-201ENST00000434793 351 ntBASIC16.23■□□□□ 0.19
RPRD1AQ96P16 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 CRB3P1-201ENST00000449338 276 ntBASIC16.23■□□□□ 0.19
RPRD1AQ96P16 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 AC055876.2-201ENST00000531834 546 ntBASIC16.23■□□□□ 0.19
RPRD1AQ96P16 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 SLC7A15P-201ENST00000424028 1363 ntBASIC16.23■□□□□ 0.19
RPRD1AQ96P16 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPRD1AQ96P16 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 CICP13-201ENST00000422015 2789 ntBASIC16.22■□□□□ 0.19
RPRD1AQ96P16 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 AL035633.1-201ENST00000406139 838 ntBASIC16.22■□□□□ 0.19
RPRD1AQ96P16 AC087499.6-201ENST00000411576 835 ntBASIC16.22■□□□□ 0.19
RPRD1AQ96P16 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 TOMM22P5-201ENST00000416399 439 ntBASIC16.22■□□□□ 0.19
RPRD1AQ96P16 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 AL158212.4-201ENST00000624062 1286 ntBASIC16.22■□□□□ 0.19
RPRD1AQ96P16 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 AL391825.1-201ENST00000457671 1364 ntBASIC16.22■□□□□ 0.19
RPRD1AQ96P16 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms