Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.74■□□□□ 0.27
ALPK3Q96L96 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.74■□□□□ 0.27
ALPK3Q96L96 RPL18AP3-201ENST00000462885 528 ntBASIC16.74■□□□□ 0.27
ALPK3Q96L96 ALG1L13P-202ENST00000519320 584 ntBASIC16.74■□□□□ 0.27
ALPK3Q96L96 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.74■□□□□ 0.27
ALPK3Q96L96 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.74■□□□□ 0.27
ALPK3Q96L96 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.74■□□□□ 0.27
ALPK3Q96L96 AC073911.3-201ENST00000624401 631 ntBASIC16.74■□□□□ 0.27
ALPK3Q96L96 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ALPK3Q96L96 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.74■□□□□ 0.27
ALPK3Q96L96 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ALPK3Q96L96 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.73■□□□□ 0.27
ALPK3Q96L96 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.73■□□□□ 0.27
ALPK3Q96L96 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ALPK3Q96L96 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALPK3Q96L96 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.73■□□□□ 0.27
ALPK3Q96L96 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC16.73■□□□□ 0.27
ALPK3Q96L96 MIR5196-201ENST00000578146 115 ntBASIC16.73■□□□□ 0.27
ALPK3Q96L96 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ALPK3Q96L96 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ALPK3Q96L96 AL132780.4-201ENST00000624870 1135 ntBASIC16.73■□□□□ 0.27
ALPK3Q96L96 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALPK3Q96L96 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ALPK3Q96L96 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALPK3Q96L96 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.73■□□□□ 0.27
ALPK3Q96L96 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALPK3Q96L96 RNF216P1-203ENST00000404404 2427 ntBASIC16.73■□□□□ 0.27
ALPK3Q96L96 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.73■□□□□ 0.27
ALPK3Q96L96 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ALPK3Q96L96 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALPK3Q96L96 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 AC004066.1-201ENST00000502488 802 ntBASIC16.72■□□□□ 0.27
ALPK3Q96L96 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 C2orf69P1-201ENST00000563532 1093 ntBASIC16.72■□□□□ 0.27
ALPK3Q96L96 AC148477.9-201ENST00000623974 539 ntBASIC16.72■□□□□ 0.27
ALPK3Q96L96 AL162426.1-201ENST00000624141 743 ntBASIC16.72■□□□□ 0.27
ALPK3Q96L96 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 AL132994.2-201ENST00000603120 687 ntBASIC16.72■□□□□ 0.27
ALPK3Q96L96 AL161773.1-201ENST00000624845 863 ntBASIC16.72■□□□□ 0.27
ALPK3Q96L96 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.72■□□□□ 0.27
ALPK3Q96L96 Z98259.2-201ENST00000641583 609 ntBASIC16.72■□□□□ 0.27
ALPK3Q96L96 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALPK3Q96L96 AC105020.1-201ENST00000435356 2205 ntBASIC16.72■□□□□ 0.27
ALPK3Q96L96 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALPK3Q96L96 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALPK3Q96L96 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ALPK3Q96L96 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ALPK3Q96L96 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALPK3Q96L96 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.71■□□□□ 0.27
ALPK3Q96L96 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.71■□□□□ 0.27
ALPK3Q96L96 AC012313.1-201ENST00000593393 3059 ntBASIC16.71■□□□□ 0.27
ALPK3Q96L96 AL512430.1-201ENST00000392575 860 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms