Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 AL359711.2-201ENST00000563105 872 ntBASIC16.94■□□□□ 0.3
SNX27Q96L92 AC124283.3-201ENST00000570869 594 ntBASIC16.94■□□□□ 0.3
SNX27Q96L92 MIR4259-201ENST00000584466 101 ntBASIC16.94■□□□□ 0.3
SNX27Q96L92 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX27Q96L92 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX27Q96L92 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SNX27Q96L92 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.94■□□□□ 0.3
SNX27Q96L92 U62317.3-201ENST00000608319 855 ntBASIC16.94■□□□□ 0.3
SNX27Q96L92 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.94■□□□□ 0.3
SNX27Q96L92 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.94■□□□□ 0.3
SNX27Q96L92 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.94■□□□□ 0.3
SNX27Q96L92 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SNX27Q96L92 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX27Q96L92 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX27Q96L92 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.94■□□□□ 0.3
SNX27Q96L92 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.94■□□□□ 0.3
SNX27Q96L92 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.93■□□□□ 0.3
SNX27Q96L92 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SNX27Q96L92 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.93■□□□□ 0.3
SNX27Q96L92 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.93■□□□□ 0.3
SNX27Q96L92 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SNX27Q96L92 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.93■□□□□ 0.3
SNX27Q96L92 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SNX27Q96L92 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 RPL13AP25-201ENST00000484130 612 ntBASIC16.93■□□□□ 0.3
SNX27Q96L92 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.93■□□□□ 0.3
SNX27Q96L92 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.93■□□□□ 0.3
SNX27Q96L92 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.93■□□□□ 0.3
SNX27Q96L92 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.93■□□□□ 0.3
SNX27Q96L92 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.93■□□□□ 0.3
SNX27Q96L92 RPSAP52-203ENST00000622976 1023 ntBASIC16.93■□□□□ 0.3
SNX27Q96L92 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SNX27Q96L92 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SNX27Q96L92 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SNX27Q96L92 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SNX27Q96L92 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 AC103702.1-201ENST00000548801 2630 ntBASIC16.93■□□□□ 0.3
SNX27Q96L92 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SNX27Q96L92 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.93■□□□□ 0.3
SNX27Q96L92 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX27Q96L92 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX27Q96L92 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX27Q96L92 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.92■□□□□ 0.3
SNX27Q96L92 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX27Q96L92 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX27Q96L92 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNX27Q96L92 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX27Q96L92 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNX27Q96L92 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX27Q96L92 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SNX27Q96L92 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC16.92■□□□□ 0.3
SNX27Q96L92 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SNX27Q96L92 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SNX27Q96L92 AC120045.2-201ENST00000567334 178 ntBASIC16.92■□□□□ 0.3
SNX27Q96L92 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
SNX27Q96L92 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.92■□□□□ 0.3
SNX27Q96L92 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.92■□□□□ 0.3
SNX27Q96L92 AC133539.2-201ENST00000604757 467 ntBASIC16.92■□□□□ 0.3
SNX27Q96L92 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.92■□□□□ 0.3
SNX27Q96L92 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SNX27Q96L92 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.92■□□□□ 0.3
SNX27Q96L92 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNX27Q96L92 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.92■□□□□ 0.3
SNX27Q96L92 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNX27Q96L92 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SNX27Q96L92 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.92■□□□□ 0.3
SNX27Q96L92 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.92■□□□□ 0.3
SNX27Q96L92 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX27Q96L92 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.92■□□□□ 0.3
SNX27Q96L92 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX27Q96L92 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX27Q96L92 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.91■□□□□ 0.3
SNX27Q96L92 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX27Q96L92 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX27Q96L92 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX27Q96L92 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX27Q96L92 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX27Q96L92 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms