Protein–RNA interactions for Protein: Q96KT6

LINC00208, Putative uncharacterized protein encoded by LINC00208, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00208Q96KT6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 AC097374.2-201ENST00000618617 1306 ntBASIC8.98□□□□□ -0.97
LINC00208Q96KT6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 AC092135.3-201ENST00000624151 1846 ntBASIC8.98□□□□□ -0.97
LINC00208Q96KT6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
LINC00208Q96KT6 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 SLC9A3P3-201ENST00000457608 2229 ntBASIC8.97□□□□□ -0.97
LINC00208Q96KT6 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 KRT89P-201ENST00000620027 1478 ntBASIC8.97□□□□□ -0.97
LINC00208Q96KT6 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 AC126365.1-201ENST00000578585 1514 ntBASIC8.97□□□□□ -0.97
LINC00208Q96KT6 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 AC004911.1-201ENST00000416316 871 ntBASIC8.97□□□□□ -0.97
LINC00208Q96KT6 MTCL1P1-201ENST00000446207 792 ntBASIC8.97□□□□□ -0.97
LINC00208Q96KT6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 STK25P1-201ENST00000585406 838 ntBASIC8.97□□□□□ -0.97
LINC00208Q96KT6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 AC024243.1-201ENST00000609234 778 ntBASIC8.97□□□□□ -0.97
LINC00208Q96KT6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 AC073912.3-201ENST00000624414 853 ntBASIC8.97□□□□□ -0.97
LINC00208Q96KT6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC00208Q96KT6 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms