Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 MIR1238-201ENST00000408483 83 ntBASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 AC011467.2-201ENST00000598425 242 ntBASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 AL365330.1-201ENST00000607459 531 ntBASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 REXO1L3P-201ENST00000622202 1288 ntBASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 AL591122.2-201ENST00000624125 1853 ntBASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CHCHD1Q96BP2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 SPDYE21P-201ENST00000413323 827 ntBASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 AC012618.2-201ENST00000428058 849 ntBASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 PMS2P1-201ENST00000431037 1228 ntBASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 AL359075.1-203ENST00000462729 1002 ntBASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 AC011840.4-201ENST00000578471 627 ntBASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 AC104771.1-201ENST00000603335 964 ntBASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 LINC01023-201ENST00000606054 436 ntBASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 AL353135.1-201ENST00000606729 504 ntBASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 AL049637.2-201ENST00000641778 930 ntBASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CHCHD1Q96BP2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
CHCHD1Q96BP2 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CHCHD1Q96BP2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CHCHD1Q96BP2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CHCHD1Q96BP2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms