Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 KRT8P44-201ENST00000441609 1350 ntBASIC13.85□□□□□ -0.19
TMEM54Q969K7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 C18orf15-201ENST00000623680 2534 ntBASIC13.85□□□□□ -0.19
TMEM54Q969K7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 AL512638.1-201ENST00000457493 794 ntBASIC13.85□□□□□ -0.19
TMEM54Q969K7 CYMP-203ENST00000474680 1263 ntBASIC13.85□□□□□ -0.19
TMEM54Q969K7 AC093214.1-201ENST00000511688 1107 ntBASIC13.85□□□□□ -0.19
TMEM54Q969K7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 AC008738.7-201ENST00000609744 511 ntBASIC13.85□□□□□ -0.19
TMEM54Q969K7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 AC138969.3-201ENST00000546612 1459 ntBASIC13.85□□□□□ -0.19
TMEM54Q969K7 AC138932.2-201ENST00000548268 1459 ntBASIC13.85□□□□□ -0.19
TMEM54Q969K7 AC126755.4-201ENST00000549796 1459 ntBASIC13.85□□□□□ -0.19
TMEM54Q969K7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.85□□□□□ -0.19
TMEM54Q969K7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM54Q969K7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 AC011270.2-201ENST00000624293 2550 ntBASIC13.84□□□□□ -0.19
TMEM54Q969K7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 AL109954.1-202ENST00000564051 2148 ntBASIC13.84□□□□□ -0.19
TMEM54Q969K7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 KRT18P43-201ENST00000469825 1281 ntBASIC13.84□□□□□ -0.19
TMEM54Q969K7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 TIMM17BP1-201ENST00000545713 516 ntBASIC13.84□□□□□ -0.19
TMEM54Q969K7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 AC004840.1-201ENST00000636359 365 ntBASIC13.84□□□□□ -0.19
TMEM54Q969K7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM54Q969K7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM54Q969K7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
TMEM54Q969K7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.83□□□□□ -0.19
TMEM54Q969K7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms