Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 AL662799.1-202ENST00000614205 422 ntBASIC17.78■□□□□ 0.44
TNFRSF25Q93038 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF25Q93038 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 GHSR-202ENST00000427970 912 ntBASIC17.77■□□□□ 0.44
TNFRSF25Q93038 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 AL645728.2-202ENST00000641679 227 ntBASIC17.77■□□□□ 0.44
TNFRSF25Q93038 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF25Q93038 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.77■□□□□ 0.43
TNFRSF25Q93038 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TNFRSF25Q93038 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.77■□□□□ 0.43
TNFRSF25Q93038 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TNFRSF25Q93038 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TNFRSF25Q93038 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.77■□□□□ 0.43
TNFRSF25Q93038 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.76■□□□□ 0.43
TNFRSF25Q93038 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 TSPY16P-201ENST00000449843 468 ntBASIC17.76■□□□□ 0.43
TNFRSF25Q93038 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 TPRX2P-201ENST00000535362 881 ntBASIC17.76■□□□□ 0.43
TNFRSF25Q93038 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 RN7SL204P-201ENST00000582831 262 ntBASIC17.76■□□□□ 0.43
TNFRSF25Q93038 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF25Q93038 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF25Q93038 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms