Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.96□□□□□ -0.17
AP3S1Q92572 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.96□□□□□ -0.17
AP3S1Q92572 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S1Q92572 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S1Q92572 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S1Q92572 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
AP3S1Q92572 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S1Q92572 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.96□□□□□ -0.17
AP3S1Q92572 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP3S1Q92572 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.96□□□□□ -0.18
AP3S1Q92572 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP3S1Q92572 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP3S1Q92572 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP3S1Q92572 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP3S1Q92572 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.96□□□□□ -0.18
AP3S1Q92572 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP3S1Q92572 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
AP3S1Q92572 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP3S1Q92572 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.95□□□□□ -0.18
AP3S1Q92572 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
AP3S1Q92572 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.95□□□□□ -0.18
AP3S1Q92572 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.95□□□□□ -0.18
AP3S1Q92572 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.95□□□□□ -0.18
AP3S1Q92572 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
AP3S1Q92572 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 AC015656.1-201ENST00000624209 3578 ntBASIC13.95□□□□□ -0.18
AP3S1Q92572 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.95□□□□□ -0.18
AP3S1Q92572 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
AP3S1Q92572 BX005266.1-201ENST00000473402 457 ntBASIC13.95□□□□□ -0.18
AP3S1Q92572 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
AP3S1Q92572 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.95□□□□□ -0.18
AP3S1Q92572 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.95□□□□□ -0.18
AP3S1Q92572 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
AP3S1Q92572 AC091076.1-201ENST00000610741 619 ntBASIC13.95□□□□□ -0.18
AP3S1Q92572 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.95□□□□□ -0.18
AP3S1Q92572 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.95□□□□□ -0.18
AP3S1Q92572 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
AP3S1Q92572 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.95□□□□□ -0.18
AP3S1Q92572 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.95□□□□□ -0.18
AP3S1Q92572 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
AP3S1Q92572 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
AP3S1Q92572 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 NSUN5P1-202ENST00000421140 1535 ntBASIC13.95□□□□□ -0.18
AP3S1Q92572 NSUN5P2-203ENST00000457352 1529 ntBASIC13.95□□□□□ -0.18
AP3S1Q92572 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.95□□□□□ -0.18
AP3S1Q92572 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S1Q92572 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S1Q92572 AC134407.2-201ENST00000625089 1978 ntBASIC13.94□□□□□ -0.18
AP3S1Q92572 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S1Q92572 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AP3S1Q92572 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S1Q92572 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AP3S1Q92572 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.94□□□□□ -0.18
AP3S1Q92572 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S1Q92572 HSPA7-201ENST00000445535 1927 ntBASIC13.94□□□□□ -0.18
AP3S1Q92572 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.94□□□□□ -0.18
AP3S1Q92572 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AP3S1Q92572 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S1Q92572 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AP3S1Q92572 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AP3S1Q92572 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S1Q92572 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AP3S1Q92572 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.94□□□□□ -0.18
AP3S1Q92572 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S1Q92572 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S1Q92572 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S1Q92572 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AP3S1Q92572 AC113347.1-201ENST00000413321 391 ntBASIC13.94□□□□□ -0.18
AP3S1Q92572 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AP3S1Q92572 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
AP3S1Q92572 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.94□□□□□ -0.18
AP3S1Q92572 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S1Q92572 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.94□□□□□ -0.18
AP3S1Q92572 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.94□□□□□ -0.18
AP3S1Q92572 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.94□□□□□ -0.18
AP3S1Q92572 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms