Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSMEM1Q8WWF3 PCDHA3-202ENST00000532566 4594 ntBASIC13.15□□□□□ -0.31
SSMEM1Q8WWF3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SSMEM1Q8WWF3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
SSMEM1Q8WWF3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SSMEM1Q8WWF3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SSMEM1Q8WWF3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
SSMEM1Q8WWF3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 LINC01144-201ENST00000626198 1710 ntBASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 AC026979.3-201ENST00000607315 403 ntBASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 AF228730.6-201ENST00000641497 218 ntBASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 AC084121.3-201ENST00000641716 218 ntBASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 AC105233.6-201ENST00000642093 218 ntBASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 AC073347.1-201ENST00000421633 2643 ntBASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSMEM1Q8WWF3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 AP003680.1-201ENST00000598970 3660 ntBASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSMEM1Q8WWF3 AC015922.1-201ENST00000421102 1152 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms