Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 AC007431.3-201ENST00000623221 587 ntBASIC18.48■□□□□ 0.55
STAG1Q8WVM7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 WASH4P-201ENST00000564273 1246 ntBASIC18.47■□□□□ 0.55
STAG1Q8WVM7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 AC084364.1-201ENST00000551967 1556 ntBASIC18.47■□□□□ 0.55
STAG1Q8WVM7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.47■□□□□ 0.55
STAG1Q8WVM7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 MYCLP2-201ENST00000449268 967 ntBASIC18.46■□□□□ 0.55
STAG1Q8WVM7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 ELK1P1-201ENST00000485699 580 ntBASIC18.46■□□□□ 0.55
STAG1Q8WVM7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 BRI3BPP1-201ENST00000594224 787 ntBASIC18.46■□□□□ 0.55
STAG1Q8WVM7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.46■□□□□ 0.55
STAG1Q8WVM7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
STAG1Q8WVM7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.46■□□□□ 0.54
STAG1Q8WVM7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.46■□□□□ 0.54
STAG1Q8WVM7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
STAG1Q8WVM7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.45■□□□□ 0.54
STAG1Q8WVM7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
STAG1Q8WVM7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.45■□□□□ 0.54
STAG1Q8WVM7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
STAG1Q8WVM7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
STAG1Q8WVM7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
STAG1Q8WVM7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
STAG1Q8WVM7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.45■□□□□ 0.54
STAG1Q8WVM7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
STAG1Q8WVM7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms