Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC133539.2-201ENST00000604757 467 ntBASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 MIR6775-201ENST00000617557 69 ntBASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 KRT8P22-201ENST00000562317 1415 ntBASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 ANKRD19P-201ENST00000338192 862 ntBASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 TOMM22P5-201ENST00000416399 439 ntBASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 AL359711.2-201ENST00000563105 872 ntBASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 CU634019.7-201ENST00000624153 1185 ntBASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 FP236241.2-201ENST00000624906 1185 ntBASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 REXO1L1P-202ENST00000608646 1974 ntBASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHKBP1Q8TBC3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 AL162726.2-201ENST00000438986 1017 ntBASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 SLED1-202ENST00000512051 380 ntBASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 COX11-210ENST00000639671 696 ntBASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHKBP1Q8TBC3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms