Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 AZGP1P1-201ENST00000411909 902 ntBASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 SPDYE7P-202ENST00000420373 878 ntBASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 RPL37AP1-201ENST00000412502 279 ntBASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 AL645939.2-201ENST00000427340 991 ntBASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 HIST3H2BA-201ENST00000436555 524 ntBASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 DUX4L27-201ENST00000554796 1261 ntBASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 AC025678.2-201ENST00000562061 970 ntBASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 AC051619.7-201ENST00000568314 623 ntBASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 MIR4313-201ENST00000580760 101 ntBASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 AC239800.4-201ENST00000603712 296 ntBASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 AC026979.3-201ENST00000607315 403 ntBASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 SPDYE12P-201ENST00000618416 771 ntBASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SIMC1Q8NDZ2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms