Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 AC211486.1-202ENST00000416371 468 ntBASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 AC211476.1-201ENST00000503899 468 ntBASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF3Q8N9W5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 AC093520.2-201ENST00000561830 333 ntBASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 AC105021.1-202ENST00000570572 669 ntBASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF3Q8N9W5 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF3Q8N9W5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms