Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 FAM86LP-201ENST00000478302 853 ntBASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 AC104596.2-201ENST00000512793 793 ntBASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 TP53TG3HP-202ENST00000569755 579 ntBASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 CHCHD2P3-201ENST00000603038 451 ntBASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 AL662799.1-202ENST00000614205 422 ntBASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
TRAM1L1Q8N609 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
TRAM1L1Q8N609 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAM1L1Q8N609 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAM1L1Q8N609 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAM1L1Q8N609 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAM1L1Q8N609 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.52■□□□□ 0.07
TRAM1L1Q8N609 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAM1L1Q8N609 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 AC123567.1-201ENST00000548294 1261 ntBASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms