Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 AL513523.2-202ENST00000427283 2040 ntBASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
SYNPOQ8N3V7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 MIR1247-201ENST00000408206 136 ntBASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 GPAA1P2-201ENST00000417923 928 ntBASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 CNN2P8-201ENST00000421872 913 ntBASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 AC026410.3-201ENST00000514280 936 ntBASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 AL139099.5-201ENST00000635274 300 ntBASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPOQ8N3V7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SYNPOQ8N3V7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SYNPOQ8N3V7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SYNPOQ8N3V7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
SYNPOQ8N3V7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SYNPOQ8N3V7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
SYNPOQ8N3V7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SYNPOQ8N3V7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.96■□□□□ 0.14
SYNPOQ8N3V7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SYNPOQ8N3V7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.96■□□□□ 0.14
SYNPOQ8N3V7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SYNPOQ8N3V7 LINC02199-201ENST00000506655 2702 ntBASIC15.96■□□□□ 0.14
SYNPOQ8N3V7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 AL139384.1-201ENST00000612143 3047 ntBASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 KRT8P13-201ENST00000463294 1010 ntBASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 AC099548.2-209ENST00000480264 625 ntBASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
SYNPOQ8N3V7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms