Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 AC025181.2-201ENST00000606994 802 ntBASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 AC005695.3-201ENST00000614522 232 ntBASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS4Q8IUM7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 AC015818.8-201ENST00000587907 1519 ntBASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 CALR4P-201ENST00000431943 946 ntBASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 ECM1P1-201ENST00000604092 1279 ntBASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 MTHFR-217ENST00000641820 1569 ntBASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.71■□□□□ 0.27
NPAS4Q8IUM7 AC124067.4-201ENST00000519691 2379 ntBASIC16.71■□□□□ 0.26
NPAS4Q8IUM7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.71■□□□□ 0.26
NPAS4Q8IUM7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
NPAS4Q8IUM7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NPAS4Q8IUM7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.71■□□□□ 0.26
NPAS4Q8IUM7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
NPAS4Q8IUM7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 TPM3P8-201ENST00000330554 643 ntBASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 RPSAP36-202ENST00000494591 1261 ntBASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms