Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRTM4Q86VH4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRTM4Q86VH4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRTM4Q86VH4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 PRAL-201ENST00000624952 3286 ntBASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 RN7SL399P-201ENST00000471648 279 ntBASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 AC008494.3-201ENST00000606615 944 ntBASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 AC105233.6-201ENST00000642093 218 ntBASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
LRRTM4Q86VH4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 AL121723.1-201ENST00000445194 1519 ntBASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 AL133267.1-201ENST00000398220 340 ntBASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 MYCLP2-201ENST00000449268 967 ntBASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 CLK3P2-201ENST00000427566 1453 ntBASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM4Q86VH4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms