Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 AP006294.1-201ENST00000415407 339 ntBASIC18.68■□□□□ 0.58
CTR9Q6PD62 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 INE1-201ENST00000456273 945 ntBASIC18.68■□□□□ 0.58
CTR9Q6PD62 FAM86LP-201ENST00000478302 853 ntBASIC18.68■□□□□ 0.58
CTR9Q6PD62 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 AC036164.1-201ENST00000570544 333 ntBASIC18.68■□□□□ 0.58
CTR9Q6PD62 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 AC008741.2-201ENST00000612792 3115 ntBASIC18.68■□□□□ 0.58
CTR9Q6PD62 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 AL121723.1-201ENST00000445194 1519 ntBASIC18.68■□□□□ 0.58
CTR9Q6PD62 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTR9Q6PD62 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.68■□□□□ 0.58
CTR9Q6PD62 AP003680.1-201ENST00000598970 3660 ntBASIC18.68■□□□□ 0.58
CTR9Q6PD62 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTR9Q6PD62 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTR9Q6PD62 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTR9Q6PD62 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTR9Q6PD62 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTR9Q6PD62 LINC00554-201ENST00000564841 3011 ntBASIC18.67■□□□□ 0.58
CTR9Q6PD62 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTR9Q6PD62 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTR9Q6PD62 RN7SL752P-201ENST00000463779 287 ntBASIC18.67■□□□□ 0.58
CTR9Q6PD62 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 AC104596.2-201ENST00000512793 793 ntBASIC18.67■□□□□ 0.58
CTR9Q6PD62 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTR9Q6PD62 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTR9Q6PD62 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTR9Q6PD62 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.67■□□□□ 0.58
CTR9Q6PD62 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTR9Q6PD62 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms