Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 TUBB3P1-201ENST00000405796 1332 ntBASIC18.84■□□□□ 0.61
RNF20Q5VTR2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 HLA-V-204ENST00000476601 1289 ntBASIC18.84■□□□□ 0.61
RNF20Q5VTR2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 AC009090.5-201ENST00000624886 2285 ntBASIC18.84■□□□□ 0.61
RNF20Q5VTR2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF20Q5VTR2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF20Q5VTR2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF20Q5VTR2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF20Q5VTR2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
RNF20Q5VTR2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF20Q5VTR2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF20Q5VTR2 FO538757.1-201ENST00000623083 1397 ntBASIC18.83■□□□□ 0.61
RNF20Q5VTR2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF20Q5VTR2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
RNF20Q5VTR2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF20Q5VTR2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF20Q5VTR2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.83■□□□□ 0.61
RNF20Q5VTR2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 AC015911.4-201ENST00000588022 1070 ntBASIC18.83■□□□□ 0.6
RNF20Q5VTR2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 AP001160.2-201ENST00000596071 487 ntBASIC18.83■□□□□ 0.6
RNF20Q5VTR2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF20Q5VTR2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF20Q5VTR2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms