Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 HIST3H2BA-201ENST00000436555 524 ntBASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 AC009407.1-201ENST00000568958 598 ntBASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 UGT1A2P-201ENST00000454886 866 ntBASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 AC134407.2-201ENST00000625089 1978 ntBASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TTC39BQ5VTQ0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 PPT1-215ENST00000641471 2368 ntBASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 AC074044.1-201ENST00000609673 707 ntBASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms