Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 AC087481.3-201ENST00000602886 1894 ntBASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 KRT18P13-201ENST00000400056 1290 ntBASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 SPDYE11-202ENST00000450699 704 ntBASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 AC243562.1-201ENST00000560672 389 ntBASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 AL135744.1-201ENST00000565098 629 ntBASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 SPDYE9P-201ENST00000570642 692 ntBASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 MIR4469-201ENST00000583919 79 ntBASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 AC010327.4-202ENST00000591484 748 ntBASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 AC073389.1-201ENST00000595595 795 ntBASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 SPDYE10P-202ENST00000612005 668 ntBASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 SPDYE8P-202ENST00000612377 668 ntBASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 AC008267.7-201ENST00000624570 1194 ntBASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.76□□□□□ -0.21
ATPAF1Q5TC12 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 KRT8P23-201ENST00000560090 1207 ntBASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms