Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ATP2B3Q16720 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ATP2B3Q16720 BRI3BPP1-201ENST00000594224 787 ntBASIC19.29■□□□□ 0.68
ATP2B3Q16720 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.29■□□□□ 0.68
ATP2B3Q16720 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ATP2B3Q16720 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ATP2B3Q16720 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ATP2B3Q16720 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2B3Q16720 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2B3Q16720 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.29■□□□□ 0.68
ATP2B3Q16720 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2B3Q16720 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ATP2B3Q16720 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2B3Q16720 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B3Q16720 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B3Q16720 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 AL442647.2-201ENST00000429864 857 ntBASIC19.27■□□□□ 0.68
ATP2B3Q16720 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 AC000095.1-201ENST00000603208 874 ntBASIC19.27■□□□□ 0.68
ATP2B3Q16720 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 AL033527.5-201ENST00000641382 801 ntBASIC19.27■□□□□ 0.68
ATP2B3Q16720 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B3Q16720 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
ATP2B3Q16720 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B3Q16720 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B3Q16720 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
ATP2B3Q16720 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B3Q16720 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B3Q16720 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
ATP2B3Q16720 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B3Q16720 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B3Q16720 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B3Q16720 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
ATP2B3Q16720 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
ATP2B3Q16720 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
ATP2B3Q16720 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.27■□□□□ 0.67
ATP2B3Q16720 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms